Shigella sp. PAMC 28760: A0259_22025
Help
Entry
A0259_22025 CDS
T04390
Name
(GenBank) lipopolysaccharide core heptosyltransferase RfaQ
KO
K02849
lipopolysaccharide heptosyltransferase III [EC:
2.4.99.25
]
Organism
shq
Shigella sp. PAMC 28760
Pathway
shq00540
Lipopolysaccharide biosynthesis
shq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
A0259_22025
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
shq01005
]
A0259_22025
Enzymes [BR:
shq01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.25 lipopolysaccharide heptosyltransferase III
A0259_22025
Lipopolysaccharide biosynthesis proteins [BR:
shq01005
]
Core region
A0259_22025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AMR25151
LinkDB
All DBs
Position
complement(4453985..4455007)
Genome browser
AA seq
340 aa
AA seq
DB search
MRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQDTIPILSENPEINALYGIKNKKAKASEK
IANFFHLIKVLRANKYDLIVNLTDQWMVAILVRLLNARVKISQDYHHRQSAFWRKSFTHL
VPLQGGNVVESNLSVLTPLGLDSLVKQTTMSYPPASWKRMRRELDHAGVGQNYVVIQPTA
RQIFKCWDNAKFSAVIDALHARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKVT
FPELGALIDHAQLFIGVDSAPAHIAAAVNTPLISLFGATDHIFWRPWSNNMIQFWAGDYR
EMPTRDQRDRNEMYLSAIPAADVIAAVDKLLPSSTTGTSL
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttcatggggatatgttattaacgactcccgtcattagttcgctgaaaaaaaat
taccctgacgcaaaaatcgatgtgctgctttatcaggacaccatcccgatcctgtctgaa
aatccagagattaacgcgctctacggcataaaaaataaaaaagcaaaagcctcagaaaaa
attgccaacttttttcatctcatcaaggtattacgtgccaataagtatgaccttatcgtc
aatcttaccgatcaatggatggttgctatactggttcgcttattaaatgcccgtgtgaaa
atttcccaggattatcatcatcggcagtctgctttttggcgtaaaagtttcacccatttg
gtgccgttgcagggtggaaatgtggtggaaagtaacttatccgtgctgacaccattggga
cttgattcgttggtgaagcagacaaccatgagttacccgcctgcaagctggaaacgtatg
cgtcgcgaacttgatcacgctggtgttggacaaaattatgtggttatccaacctacggcg
cggcaaatcttcaaatgctgggacaacgccaagttttccgctgtgattgatgccttacat
gctcgtggttatgaagttgttctgacgtccggcccggataaagacgatctggcctgcgtc
aatgaaattgcgcagggatgccagacgccaccagtaacggcgctggctggaaaggtgacc
ttcccggaacttggtgcgttaatcgatcatgcgcagctgtttattggcgttgattccgca
ccggcgcatattgccgctgcagttaatacgccgctgatatcgctgtttggcgcaacagat
catattttctggcgtccctggtcaaataacatgattcaattctgggcgggagattaccgg
gaaatgccaacgcgcgatcagcgtgaccgaaatgagatgtatctttcggctattccggcg
gcagatgtcattgctgctgtcgataaattactgccctcctccacgacaggtacgtcgtta
tga
DBGET
integrated database retrieval system
