Sarcophilus harrisii (Tasmanian devil): 100913968
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Entry
100913968 CDS
T02286
Gene name
ITGB1
Definition
(RefSeq) integrin beta-1 isoform X1
KO
K05719
integrin beta 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04015
Rap1 signaling pathway
shr04145
Phagosome
shr04151
PI3K-Akt signaling pathway
shr04360
Axon guidance
shr04510
Focal adhesion
shr04512
ECM-receptor interaction
shr04514
Cell adhesion molecules
shr04530
Tight junction
shr04611
Platelet activation
shr04670
Leukocyte transendothelial migration
shr04810
Regulation of actin cytoskeleton
shr05100
Bacterial invasion of epithelial cells
shr05133
Pertussis
shr05135
Yersinia infection
shr05140
Leishmaniasis
shr05145
Toxoplasmosis
shr05165
Human papillomavirus infection
shr05200
Pathways in cancer
shr05205
Proteoglycans in cancer
shr05222
Small cell lung cancer
shr05410
Hypertrophic cardiomyopathy
shr05412
Arrhythmogenic right ventricular cardiomyopathy
shr05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
100913968 (ITGB1)
04151 PI3K-Akt signaling pathway
100913968 (ITGB1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100913968 (ITGB1)
04514 Cell adhesion molecules
100913968 (ITGB1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100913968 (ITGB1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
100913968 (ITGB1)
04530 Tight junction
100913968 (ITGB1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
100913968 (ITGB1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
100913968 (ITGB1)
04670 Leukocyte transendothelial migration
100913968 (ITGB1)
09158 Development and regeneration
04360 Axon guidance
100913968 (ITGB1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100913968 (ITGB1)
05205 Proteoglycans in cancer
100913968 (ITGB1)
09162 Cancer: specific types
05222 Small cell lung cancer
100913968 (ITGB1)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
100913968 (ITGB1)
05412 Arrhythmogenic right ventricular cardiomyopathy
100913968 (ITGB1)
05414 Dilated cardiomyopathy
100913968 (ITGB1)
09171 Infectious disease: bacterial
05135 Yersinia infection
100913968 (ITGB1)
05133 Pertussis
100913968 (ITGB1)
05100 Bacterial invasion of epithelial cells
100913968 (ITGB1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100913968 (ITGB1)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
100913968 (ITGB1)
05140 Leishmaniasis
100913968 (ITGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shr04131
]
100913968 (ITGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shr04147
]
100913968 (ITGB1)
04515 Cell adhesion molecules [BR:
shr04515
]
100913968 (ITGB1)
04090 CD molecules [BR:
shr04090
]
100913968 (ITGB1)
Membrane trafficking [BR:
shr04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
100913968 (ITGB1)
Exosome [BR:
shr04147
]
Exosomal proteins
Proteins found in most exosomes
100913968 (ITGB1)
Cell adhesion molecules [BR:
shr04515
]
Integrins
Integrin beta subunits
100913968 (ITGB1)
CD molecules [BR:
shr04090
]
Proteins
100913968 (ITGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
PSI_integrin
I-EGF_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
100913968
NCBI-ProteinID:
XP_031795581
Ensembl:
ENSSHAG00000016377
LinkDB
All DBs
Position
5
AA seq
802 aa
AA seq
DB search
MSLQLIFWVGLVSCSISQVLSQTGGNDCLKANAKSCGECIQAGPNCGWCTNSSFLQEGMP
TSARCDDLEALEKKGCRPQDIENPRGHKTIRKNKNVTNRSKGTAEKLQPEDITQIQPQQL
TLKLRSGEPQTFALKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMYEMKRITSD
FRIGFGSFVEKTVMPYISTTPAKLRNPCTGDQNCTSPFSYKNVLSLTDKGEVFNELVGKQ
HISGNLDSPEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDG
RCHLENNVYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQAVYKELKNLIPKSAVGT
LSANSSNVIQLIIDAYNSLSSEVILENSKLPEGVTINYKSYCKNGVNGTGENGRKCSNIS
IGDEVQFEISITSNKCPKKDTETIKIKPLGFTEEVEITLQFICECECQSEGLPNSPECHE
GNGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCR
KRDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSSC
MASNGQICNGRGICVCGSCKCTDSKFQGATCEMCQTCLGVCAEHKECVQCRAFDKGEKKD
TCAEECPYFNITKVKSREDLPQPGQREALSHCKEKDVDDCWFYFTYSVNGNNEVVVHVVE
TPECPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDAQE
NPIYKSPINNFKNPNYGRKAGL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgagtttacaactaattttctgggttggactggtcagttgctcaatcagtcaagtactc
agccaaacaggtggaaatgattgcttaaaagcaaatgcaaaatcatgtggagaatgtata
caagcaggaccaaattgtggatggtgtacaaactcctcatttttacaagaaggaatgcct
acttctgcccggtgtgatgacttagaagcattagaaaagaaaggctgccgtccacaggat
atagaaaatcctcgaggccacaaaactatccgtaaaaataaaaatgtgacaaatcgcagt
aaaggtacagcagaaaaactccagcctgaagacattacccagatccaaccacagcagcta
accttgaagttacgttcgggagaaccacaaacatttgcattaaaattcaagagagctgaa
gactaccctattgacctctattatcttatggatctctcttactctatgaaagatgacttg
gagaatgtgaagagtcttggaacagatctaatgtatgagatgaagagaatcacttcagat
ttccgaattggattcggctcctttgtagagaagactgtgatgccgtacatcagcaccaca
ccggccaagctcaggaacccttgcacaggcgaccagaactgtaccagtcccttcagctac
aagaatgtgctcagccttacagacaagggggaggtgtttaatgagcttgtggggaagcag
cacatttctggcaatttggactctccagaagggggatttgatgccattatgcaggttgca
gtctgtgggtcattaattggctggagaaatgttacacgactattggttttttccactgat
gctggttttcactttgctggagatggtaaacttggtggaattgttttaccaaatgatgga
agatgtcacctagaaaataatgtatacacaatgagccattattacgattatccttctatt
gctcatcttgtccaaaaactaagtgaaaataacattcaaacaattttcgcagttacagaa
gaatttcaggctgtttacaaggaactgaagaatttgatccccaagtcagcagtgggaaca
ttgtctgcaaattccagcaatgtaattcagttgatcattgatgcatacaattccttatct
tcagaagtcattctggaaaatagcaaattgccagagggagtaacaataaattacaaatct
tactgcaaaaatggagtgaatgggacgggagaaaatggaagaaaatgttccaatatttcc
attggtgatgaggttcagtttgagattagtataacttccaacaaatgtcctaagaaagac
acagaaaccatcaaaattaaacctctaggtttcactgaagaagtagaaattacacttcag
tttatctgtgaatgtgagtgccagagtgaaggcctcccaaatagtccagaatgtcatgaa
ggaaatggaacatttgaatgcggggcctgccggtgcaatgagggacgtgttggtagacat
tgtgaatgtagtacagatgaagtaaacagtgaagacatggatgcttactgcaggaaagaa
aacagttctgaaatttgcagcaacaatggagaatgtgtctgtggacaatgtgtttgtaga
aagagagataatacaaatgaaatttattctggcaaattttgtgaatgtgacaatttcaac
tgtgatagatccaatggattgatttgtggaggaaatggtgtttgcaagtgtcgagtttgt
gaatgtaaccccaattacactggcagtgcctgtgattgttctttggatacatcttcatgt
atggcatcaaatgggcagatttgcaacggccgaggaatatgtgtatgtggttcctgtaaa
tgcaccgattctaaatttcaaggggccacttgtgaaatgtgtcagacttgtcttggtgtc
tgtgctgagcacaaagaatgtgttcagtgcagagcttttgataaaggagaaaaaaaagac
acatgtgcagaagagtgtccatacttcaacattaccaaagtaaaaagtcgagaagaccta
ccccagcctggccagcgagaggctctatcccactgtaaagagaaggatgttgatgattgc
tggttctattttacatattcggtcaatggaaacaatgaagttgttgttcatgtggtggag
acaccagagtgtcccactggtccagacatcattcccattgtagctggagtggttgcagga
attgtgctgattggtcttgcattactgctgatttggaagttgctgatgataatacatgac
agaagagaatttgctaaatttgaaaaggagaaaatgaatgcaaaatgggatgcgcaagaa
aatccgatttacaagagtcctattaataatttcaagaatccaaactatggacgtaaagct
ggtctctaa
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