Sarcophilus harrisii (Tasmanian devil): 100914529
Help
Entry
100914529 CDS
T02286
Symbol
KDM1B
Name
(RefSeq) lysine-specific histone demethylase 1B isoform X1
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shr03036
]
100914529 (KDM1B)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
100914529 (KDM1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
Thi4
SWIRM
Pyr_redox_2
FAD_binding_3
Pyr_redox
DAO
HI0933_like
FAD_oxidored
Pyr_redox_3
FAD_binding_2
Lycopene_cycl
NAD_binding_9
GIDA
2-Hacid_dh_C
IlvN
NAD_binding_7
AlaDh_PNT_C
Motif
Other DBs
NCBI-GeneID:
100914529
NCBI-ProteinID:
XP_031802656
Ensembl:
ENSSHAG00000014810
LinkDB
All DBs
Position
1:complement(543435086..543484661)
Genome browser
AA seq
819 aa
AA seq
DB search
MSTLRVRAKKKAASFDQSSDSLPLRSSGRQVKKKVVEVVPDDDDDASSEKKYRKCEKAGC
TATCPVCFSSAAERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYEKYAAWKRIWT
SNGKCEPSPKAFMADQQLPYWVQCTKPDCGKWRQLTKEIQLTSQMAQTYRCGTKPNTSVK
VEGSDQCSQPEDLRVAEVSNHWWYSMLILPPFLKDSVAAPLLSAYYPDCVGMSPSCTSTN
REASPEKVEHCKAVSGVFVPGMNQYFQPFYQPNECGKALCVRPDVMELDELYEFPEYSRD
PTMYLALRNLILALWYTNCKEALTPQKCTHHIIVRGLVRIRCVQEAERILYFMTRKGLIN
TGVLSVSPDHHLLPKDYHNKSVIIVGAGPSGLAAARQLHNFGIKVIILEAKDRIGGRVWD
DKSFKGVTVGRGAQIVNGCINNPIALMCEQLGIQMHRLGERCDLIQESGRITDPTIDKRM
DFHFNAILDVVSEWRKDKTQLQDVPLGEKIQEIYKAFIQESGIQFNELEEQVLQFHLSNL
EYACGSNLNQVSARSWDHNEFFAQFAGDHTLLTPGYSVIIEKLAEGLDIRLKFPVRTIDY
SGDDVQVTTIDGTVWAAQKVLVTVPLSLLQKGAIQFNPPLPERKTKAINSLGAGIIEKIA
LEFPYRFWDNKIQGADFFGHVPPCSSKRGLFAVFYDMDPQGKYSVLMSVITGEAVASIKN
LDDKQVLQQCMATLRELFKEQEIPDPVNFFVTRWNTEPWIQMAYSFVKTGGSGEAYDILA
EDIQGTIFFAGEATNRHFPQTVTGAYLSGVREASKIAAF
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccctcagggttcgagcaaagaaaaaggcagcttcatttgaccagtcttcagat
agtcttcctttgaggagttccgggaggcaggtgaagaaaaaagtggtagaagtagtacca
gatgatgatgatgatgcctcatctgagaagaaatatagaaaatgtgaaaaggctgggtgc
acagcaacttgtccagtttgcttctcaagtgctgctgaaagatgtgcaaaaaatggttat
acatctcgatggtatcacctatcctgtggggaacatttttgcaatgaatgctttgaccat
tactaccggagtcataaagatgggtatgaaaaatatgctgcttggaaaaggatatggact
agtaatgggaaatgtgagcctagtcccaaagcttttatggctgatcaacagcttccatat
tgggttcagtgcacaaaacctgactgtggaaaatggagacagcttacaaaggaaattcag
cttacgtcacaaatggcacagacgtatcgctgtggtaccaaaccaaacacctcagttaag
gtggagggctcagaccaatgctcacaaccagaagatctaagggtcgctgaagtgtctaat
cattggtggtattccatgcttatccttcctccctttctgaaagatagtgtggctgcccct
ttactctctgcctattatcctgactgtgtgggcatgagtccctcctgcaccagcaccaac
cgtgaagccagccctgaaaaagtggagcactgcaaggctgtttcaggtgtgtttgttcct
gggatgaaccagtacttccagcctttctaccagcccaatgaatgtggaaaagctctctgt
gtgagaccagatgtgatggaactggatgagctctatgagttcccagaatactcacgagac
cccaccatgtatttggctttgagaaaccttattcttgctctgtggtatacgaattgcaaa
gaagcacttactcctcagaaatgcactcatcacattattgtccgaggccttgtgcgcatt
agatgtgttcaggaagcggaaagaatactttattttatgacaagaaaaggtctgatcaat
actggggttttgtctgtcagtcctgaccatcatcttctcccaaaagactatcacaataaa
tcagttatcattgttggggctggtccatcaggattagcagctgctaggcaattgcacaac
tttggaattaaggtgatcatcctagaagccaaagacaggattggtggtcgagtctgggat
gataaatcctttaaaggagtcacagttggaagaggagctcagattgtcaatggctgtata
aacaaccctatagccctaatgtgtgagcaacttggtatccaaatgcacagacttggagaa
agatgcgacttgatccaggaaagtggaagaatcactgaccccactattgataagcgcatg
gactttcactttaatgccattttggatgttgtttctgagtggagaaaagacaaaactcag
ttacaagatgttcctttaggagaaaagatccaagaaatctacaaggcctttattcaggaa
tctggcatccagtttaatgaactagaggaacaagtgcttcagttccatcttagcaacttg
gaatatgcatgtggcagcaacctaaatcaggtatctgctcgttcatgggaccacaatgag
ttctttgctcagtttgctggtgatcacacacttctgactccagggtattctgtaataatt
gagaagctggctgaaggactggacattagacttaaatttccagttcggaccattgactat
tctggggatgatgtccaagtcactaccatagatgggacagtttgggcagcacaaaaggtc
ttagtcactgtacctttgtccttgctccagaaaggtgctattcagtttaacccaccattg
cctgagaggaaaacaaaagccatcaatagtttaggagcaggaatcattgaaaagattgct
ttggaatttccttatagattttgggacaataagattcaaggagctgatttttttggccat
gttcctccttgttccagtaagcgtggactttttgctgtattttatgatatggatcctcag
ggtaaatatagtgttttgatgtcagtcattactggagaggctgtagcatccattaagaac
ctggatgataaacaagtcctacaacagtgtatggccacactccgggaactattcaaagag
caggaaataccagacccagtaaacttctttgttactcggtggaacacagagccatggatc
cagatggcatatagttttgtaaaaacaggtggaagtggtgaagcttatgacatcctagca
gaagacatacaaggcactatatttttcgctggtgaggcaacaaataggcactttccacaa
acagtcacaggggcatacctgagtggtgtacgagaagcaagcaagatagcagcattttaa
DBGET
integrated database retrieval system
