Sarcophilus harrisii (Tasmanian devil): 100916847
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Entry
100916847 CDS
T02286
Symbol
HERC4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100916847 (HERC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shr04121
]
100916847 (HERC4)
Enzymes [BR:
shr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
100916847 (HERC4)
Ubiquitin system [BR:
shr04121
]
Ubiquitin ligases (E3)
HECT type E3
100916847 (HERC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
SCP_3
Motif
Other DBs
NCBI-GeneID:
100916847
NCBI-ProteinID:
XP_031812745
Ensembl:
ENSSHAG00000012243
LinkDB
All DBs
Position
2:634611225..634696403
Genome browser
AA seq
1057 aa
AA seq
DB search
MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGC
NDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPG
TEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSS
PQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLR
SQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIA
CGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYSGKCLPESDGEE
FFCVKRIFSGGDQSFSHYSCPQGLGPPDDFRCPDPSKQIWTVNETLIQRWLSYSSGRFPL
EIANEIDGTFSSAACLNGSFLAVSNDDHYRTGSKYSGVDMNAARLLFHKLIQPDHPQISQ
QVAASLEKNLLPKLTSSLPDVEALRFYLILPECPLMSDSNNFTTIAIPFGTALVNLEKAP
LKVLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRVFNSFLHTALKVLEIL
HRVNEKTGQIIQYDKFYIHEVQELIDIRNDYINWVQQQAYGMDINHGLTELTEIPVTICT
YPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPCLILVVRRENIVG
DAMEVLRKTKNIDYKKPLKVIFVGEDAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEDSR
LIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKKLLKKKASLDDLKELMPD
VGRSMQQLLDYPEDDIEDTFCLNFTITVENFGTTEVKDLIPNGADTTVSKQNRQEFVDSY
VDYIFNKSVASLFDAFHEGFHKVCGGKVLQLFHPNELQAMVIGNTNYDWKELEKNTEYKG
EYWAEHPTIKIFWEVFHELPLEKKKQFLLFLTGSDRIPILGMKSLKLVIQSTGGGEAYLP
VSHTCFNLLDLPKYTEKETLRSKLIQAIDHNEGFSLI
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgctggggaaacgcatcctttggacagctaggtttgggtggaatcgatgaagaa
attgtactagagcccaggaagagtgactttttcataaataaaaaagtccaagatgtagga
tgtggactcagacatacagtatttgtcctagatgatgggacagtatatacttgtggatgt
aatgatctaggacaattgggtcatgaaaaatccaggaagaagccagagcaggttgttgcc
ttggatgcccaaaatattgtagctgtttcatgtggagaagctcatacactcgctctcaac
gataagggccaggtgtatgcttggggacttgataccgatggacagctgggtctgccaggg
acagaagagtatataagagtgcccagaaatattaaaagtttgacagatattcagatagta
cagattgcttgcggttactatcattcccttgcactctcaaaaggaagtgaagttttttcc
tggggacagaataagcatggccagttgggtttaggctttgagttgaaaaggcagagttcc
ccacagttgatcaagtccttgcttggaatcccttttactcaagtggccgcaggcggagcc
cacagttttgttctcactctttctggagctatctttggatggggacggaacaagtttggt
cagctgggtcttaatgatgaaaatgatagatttgttcctaatttgctgaagtcactaaga
tcacagaaaatagtttatatttgttgtggagaagaccatacagcagctcttactaaggaa
ggcggggtctttacattcggagctggaggctatggtcagttggggcataactcgaccagt
catgagataaaccccagaaaagtttttgaacttatgggaagcattgtcacacagattgct
tgtggacggcagcacacttctgcttttgttccttcgtcaggaagaatttattcttttggg
cttggtggcaatgggcaacttggaactggttcaacaagcaatagaaaaagccctttcact
gtgaaaggaaattggttcccttacagtgggaaatgtctaccagaaagtgatggtgaagaa
ttcttctgtgttaagagaattttttcaggtggtgaccaaagtttttcccattattcttgt
ccacagggccttgggccaccagatgattttagatgtcctgatccttcaaagcagatctgg
accgtaaatgaaactctcattcagagatggttgagctactcctctggaagatttccgttg
gaaatagccaatgagattgacggaaccttttcttcagctgcttgtctaaatggcagtttt
ttagctgttagcaatgatgatcactatagaacaggctccaagtactcaggggttgatatg
aatgctgctagacttctctttcataaacttatacaacctgaccatcctcagatatctcag
caggtggcagctagtttggaaaagaatcttcttccaaaactgactagttccttacctgat
gttgaggcattgaggttttatctcattctaccagaatgtccgctgatgagtgattccaat
aatttcacaacaatagccattccctttggaactgcacttgtgaatctagaaaaggcgcca
ttgaaagtacttgaaaactggtggtctgtacttgaacctcccttgttcctcaagatagtg
gagctattcaaggaagtcgtagttcatcttttgaaactctacaagatcggaatccctcct
tctgaaagaagggttttcaacagcttccttcacactgctctaaaggttttggaaatactg
catagggtaaatgagaaaacgggacagatcatacagtatgacaaattttatattcatgaa
gtacaagaattaatagatatacggaatgactacatcaactgggttcaacagcaggcctat
ggaatggatatcaaccatggattgactgagttaacagaaatcccggttacaatttgtaca
tatccatttgtatttgatgcccaggcaaaaactacactgttacaaacagatgcagtcttg
cagatgcagatggctatcgaccaggcccacagacagaacgtttcctctctttttcttcct
gtgattgagtctgtgaatccttgtctaattctagtagtccgtagagaaaatattgtaggt
gatgcaatggaagtccttaggaagacaaagaatatagattataaaaagccacttaaggtt
atttttgtaggagaagatgctgttgatgcaggaggggtacgcaaagaatttttcttgctc
ataatgagagagttgttggatccaaaatatggcatgtttaggtattatgaagattctagg
ctcatttggttttctgacaagacctttgaagacagtgatttgttccacttgattggagtt
atctgtggattagcaatttataactttactattgtagacctccattttcctttggctttg
tacaagaagctgctgaaaaagaaggcgtccctggatgatttgaaggagctaatgcctgat
gttggaagaagcatgcaacaattactggattatccagaagatgatatagaggacacattt
tgtcttaattttacgatcaccgttgagaacttcggtacaactgaagtgaaagacctgatt
cctaatggggcagacactactgttagtaaacaaaataggcaggaatttgttgattcttat
gtggattacatattcaataaatcagtggcttccttatttgatgcctttcatgaaggcttc
cataaagtatgtggtgggaaagtccttcagctcttccatcctaatgaactccaggcaatg
gtgattgggaacacaaactatgattggaaagaacttgaaaagaatacagaatacaaaggg
gaatactgggcagaacatccaacaataaaaattttctgggaagtttttcatgaattgcca
ttggaaaagaaaaaacaatttctcttatttttgacaggtagtgatcggattcctattctt
ggtatgaagagtcttaaactggtcattcagtcaactggaggtggagaggcctatctccca
gtctcccatacctgttttaatcttcttgatcttccgaaatacacagagaaagaaactcta
cgatctaaactgatccaggccattgatcacaacgaaggcttcagtttaatataa
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