Sarcophilus harrisii (Tasmanian devil): 100921184
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Entry
100921184 CDS
T02286
Symbol
CNOT4
Name
(RefSeq) CCR4-NOT transcription complex subunit 4 isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100921184 (CNOT4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shr03000
]
100921184 (CNOT4)
03019 Messenger RNA biogenesis [BR:
shr03019
]
100921184 (CNOT4)
04121 Ubiquitin system [BR:
shr04121
]
100921184 (CNOT4)
Enzymes [BR:
shr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100921184 (CNOT4)
Transcription factors [BR:
shr03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
100921184 (CNOT4)
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100921184 (CNOT4)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100921184 (CNOT4)
Ubiquitin system [BR:
shr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100921184 (CNOT4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
zf-UDP
zf-C3HC4_2
zf-RING_2
Rtf2
Nup35_RRM_2
DZR_2
zf-CCCH_2
Torus
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
100921184
NCBI-ProteinID:
XP_031794977
Ensembl:
ENSSHAG00000013639
LinkDB
All DBs
Position
5:complement(183874021..183990325)
Genome browser
AA seq
710 aa
AA seq
DB search
MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
LQELYKLNPNFLQLSTGSVDKNKNKVTPLQSPIDKPSDSLSIGNGENSQQISNSDTPSPP
PGLSKPNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTSND
WPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQQEDDLGFDPFDITRKALADLIEKEL
SVQDQPSLSPTSLQNPSSHTTTAKGPGPGFLHPAAPTNANSLSSTFSVLPQRFPQFQQHR
AVYNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHSTGLGGIPIAD
NNSSVESLNMKEWQDGLRALLPNININFGGLPNASSPSNANHSAPTSNTAPTDSLNWDSP
GSWMDPAIITGIPASTGNNLDSLQDDNPPHWLKSLQALTEMDGPSAAPSQTHHSNPFSTQ
IPLHRASWNPYSPPSNPTSFHSPPPGFQTAFRPPSKTPTDLLQSSALDRH
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcagtcctgatgcaaaggaagaccctgtggaatgccccctttgcatggagccc
ttagagatcgatgatatcaactttttcccttgcacttgtggctaccaaatttgccgcttc
tgttggcatcgtattcgcactgatgagaatggactttgtcctgcttgcagaaagccatat
ccagaagacccagcagtgtataaaccactctcccaggaagaactgcaaaggataaagaat
gagaaaaaacagaagcagaatgaaaggaaacagaagatatcagagaaccgtaaacacttg
gcaagtgtacgtgtggtacaaaagaacctcgtttttgtggtaggactctcccagcgttta
gcagacccagaggttttaaaacgaccagaatattttgggaagtttggtaaaatacataaa
gttgtcatcaataatagtacatcatatgcaggctcacagggtccaagtgccagtgcttat
gtcacctatatccggtcagaagatgctctcagagccatacagtgtgtcaacaacgtagta
gtagatggcagaacacttaaggcttctctaggtacaacaaaatactgcagttacttccta
aagaatatgcagtgtccaaaaccggactgtatgtatctacatgaattgggggatgaagca
gctagcttcacaaaagaggaaatgcaggcgggtaaacaccaagagtatgaacagaagcta
cttcaagaattatataaattaaaccccaattttcttcagttatctacgggttccgttgac
aagaataagaacaaagtgacgccactgcagagccccattgacaaaccttcagattccctc
agtatagggaatggtgaaaattcccaacagatatctaacagtgatacaccatcaccacct
cctggtttatcaaaacctaatccagtcatccccatcagttcatctaatcacagtgcaagg
tccccttttgaaggggcagtaacagagtcacagtcactattctcggacaacttccggcac
cctaaccctatccctagtgggttacccccattccccagttccccacagacttccaatgac
tggccaacagcaccagaaccacagagcctcttcacatcagaaacaatcccagtgtcatcc
tctacagactggcaagcagcatttggctttggttcctctaaacagcaagaggatgacttg
gggtttgacccctttgacatcactcgcaaagccttagcagacctgattgagaaggaactg
tcagtccaagatcaaccttccctttcgcccacatctcttcagaacccttcctcacacact
acaaccgccaaagggccaggccctggatttctgcatcctgccgcacccacaaatgccaac
tctctcagtagcaccttttcagtcttgccacagaggttccctcagtttcagcaacaccgg
gcggtttataattcattcagttttccaggccaggcagcccgctatccttggatggccttt
ccacgaaatagcatcatgcacttgaaccacacagcaaatcccacctcaaatagtaatttc
ttggacttgaatctcccgccacagcacagcacaggtctgggagggatccctatagcagac
aacaacagttctgtagagagtttaaatatgaaggaatggcaggacgggctaagggcactt
ctacccaacattaacatcaactttggtggactgcccaatgcttcttccccctccaacgcc
aaccacagtgcaccaacgtccaacactgcccccacggacagcctgaattgggacagccct
ggcagctggatggaccccgccatcatcacaggtatcccagcatcaacaggaaataattta
gactctcttcaagatgacaatcctccacactggctaaaatcccttcaggccctcacagag
atggacggccccagtgctgctccgtcacaaacccatcacagtaaccccttcagcacacag
atccctctgcacagagccagctggaatccttattctcccccttcaaatcccaccagtttc
cattccccacccccaggctttcagaccgccttcagaccacccagcaaaaccccgacagat
ttactacagagttctgcactggaccgccattag
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