Sarcophilus harrisii (Tasmanian devil): 100921722
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Entry
100921722 CDS
T02286
Symbol
NEO1
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04350
TGF-beta signaling pathway
shr04360
Axon guidance
shr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
100921722 (NEO1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100921722 (NEO1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100921722 (NEO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
V-set
Interfer-bind
Ig_5
C2-set_2
Tissue_fac
fn3_2
SusE
TM_ErbB1
F5_F8_type_C
TMEM154
Herpes_UL74
EphA2_TM
FAM176
Motif
Other DBs
NCBI-GeneID:
100921722
NCBI-ProteinID:
XP_031812510
Ensembl:
ENSSHAG00000017306
LinkDB
All DBs
Position
2:complement(619611177..619840093)
Genome browser
AA seq
1549 aa
AA seq
DB search
MAAGPEPEPERGARSLVRAASLWLGCLLLLLGRRHPALAAAAAAAASPAGRSSPQPPPPG
AIVRTFTPFYFVVEPVDTLSVRGSSVILNCSAYSEPSPKIEWKKDGTFLNLVSDDRRQLL
SDGSLLINSVVHSKHNKPDEGYYQCVATVESLGTIVSRTAKLTIAGLPRFASQPESSSVY
AGNSAVLSCEVNTDLVPFVRWEQDRQPLVLDDRVMKLPNGALVISNVTEGDGGLYRCIIE
SGGPPKYSEEAELKVLPDPEIPSSLVFLSQPSPLIKVIGQSAILPCVASGVPTPVIRWTK
NDEILNPESSERLMLLAGSNLEVSDLTEEDAGTYACIADNGNETIEAQADLTVQASPEFL
KKPANIYAHESMDIVFECEVTGKPTPTVKWVKNGDMVIPSDYFKIVKEHNLQVLGLVKSD
EGFYQCIAENDVGNSQAGAQLIILDHDVAIPTLPPTSLTSATTDHLAPATAGPLPSAPRD
VVASLVSTRFIKLTWRTPASDPPGDNLTYSVFYTKEGINRERIENTSHPGEMQVTIQNLM
PETVYIFRVVAHNRHGSGERSLPLRVETQPEVQLPGPAPNIRAYASSPTSITVTWETPLS
GNGEIQNYKLYYMEKGTDNEQDVDVGSRSYTINGLKKYTEYSFRVVAYNKHGPGVSTQDV
VVRTLSDVPSAAPQNLSLEVRNSKSIVIHWQPPPAGAQNGQITGYKIRYRKSSRKSDVTE
SVGGTQLFQLIEGLDRGTEYNFRVAALTVNGTGPATDWMSAETFESDLDETRVPEVPSSL
HVRPLITSIVVSWTPPENQNIVVRGYAIGYGLGSPHAQTIRVDYKQRYYTIENLDPSSHY
VITLKAFNNVGEGIPLYESAVTRPHTDTSEVDLFVVNAPYTPVPDPTPMMPPVGVQASIL
SHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKTANATTLSYLVTGLKPNTL
YEFSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPRTIIVNWQPPSEANG
KVTGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSE
AVQFRTPKADSSDKMPNDQASGSSGKGSRPPDTGSDYKPPMSGSNSPHGSPTSPLDSNML
LVIIVSIGVLTIVVVVIIAVFCTRRTTSHQKKKRAACKSVNGSHKYKGNSKDVKPPDLWI
HHERLELKPIDKSPDPNPIMTDTPIPRNSQDITPVDNSMDSNIHQRRNSYRGHESEDSMS
TLAGRRGMRPKMMMPFDSQPPQPVISAHPIHSLDNPHHHFHSSSLASPTRSHLHLQGSPW
PIGTSLSHSDRANSTESVRNTPSTDTLPASSSQTCCTDHPDPEGATSSSYLSSAQEEGSG
PTLPTAHVRPSHPLKSFAVPAVPSPGPATYDPALPSTPLLSQQAPNHHLHSVKTASIGTL
GRSRPPMPVIVPSAPDVQETTRMLDDSESGVSAALLRAFLKARMSKHRPLRVHHLDCLAE
INGPRGLGSAVGNALALEFRSSLRYLTCISPVTWASHLTLIASHENKIG
NT seq
4650 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggggccggagcccgagcccgagcggggcgcccggagcctcgtccgcgccgcc
tccttgtggctcggctgcctcctgctgctgctcgggcgccggcacccggccctggccgcc
gccgccgccgccgccgcgtccccggccggcagaagcagtccgcagccgccgcccccagga
gccattgtgagaacatttactcccttttattttgtcgtggaaccagtggataccctttca
gttcgaggatcttctgttattctaaactgttccgcatactcagagccttcccccaaaatt
gaatggaaaaaagatggaacttttttgaatttggtgtcagatgaccggcgtcagctactg
tcagatggatctttgttaattaatagtgtggtgcattccaaacacaataagcccgatgaa
ggatattatcaatgtgtggccactgtggaaagccttggaaccatcgtaagcaggacagcc
aagctcacaattgcaggtcttcccaggtttgccagtcagccagaatcctcatcagtctat
gctggaaacagtgcagtgctcagctgtgaagtcaatactgatttggtcccatttgtgagg
tgggagcaggatcgacagccacttgttttggacgacagagtcatgaaactcccaaacgga
gctctggttatcagcaatgttacggaaggagatggagggctttatcgttgcataattgaa
agtggtggaccgcctaagtacagtgaggaggctgagctgaaagtgcttccagatcctgag
attccttccagtttggtgtttttgagccagccttctccactaatcaaagttattgggcaa
agtgcaatcttgccatgtgttgcatcaggagttcctacacctgtcatcagatggacaaaa
aatgacgagatccttaatccagaaagctctgaaaggttgatgctgctggcaggaagtaac
ttggaagtcagtgacctcacagaggaagatgctgggacctatgcctgcattgctgataat
gggaatgagacaattgaggctcaagcagacctcacagttcaagcttcaccagaattcctg
aagaagcctgctaatatatatgcacatgagtctatggatattgtgtttgaatgtgaagtg
actgggaaacccacaccaactgtaaaatgggtcaagaatggtgacatggtcatcccaagt
gattactttaagattgtcaaggaacataatcttcaggttttgggtctggtgaaatcagat
gaaggattttatcagtgcattgcagagaatgatgttggaaattcacaggctggagctcag
ctaataatccttgaccatgatgttgccatcccaacattacctcccacttcactgaccagt
gccactactgaccatctagcaccagccacagcgggaccgctaccttcagccccgagggac
gtcgtggcctcactcgtttctactcgcttcatcaaactgacttggcgaacgccggcctcg
gatcctcctggagacaacctcacctactctgtgttctacaccaaggaggggatcaaccgt
gaaaggattgaaaataccagccatccaggggaaatgcaggtgaccattcaaaatctgatg
ccagagacagtgtacatcttcagagttgtggcacacaacagacatggttctggagagcgg
tcgcttcctctacgagtagagactcagcctgaggttcagctcccgggcccagcacctaac
atccgagcatatgctagctcacctacctcaatcactgtcacatgggaaacacctttatct
ggcaatggggaaattcagaattacaagttgtactacatggaaaaggggacagataatgag
caggatgttgatgttggaagtcgctcctacaccattaatggattgaaaaaatatacagaa
tatagtttccgagtagtagcctataataaacatggtcctggagtctccacacaagatgtt
gttgttcgaacattatcagatgttcccagtgctgctcctcagaacctgtccttagaagtg
agaaattccaagagcattgtgattcactggcagccccctccagcaggcgcacagaatggg
caaattactggctacaagattcgctacaggaaatcctctcgcaaaagtgatgttacagag
agcgttggaggaacacagctgttccagttaattgagggtcttgatcggggtactgagtat
aacttccgagtggctgcacttacagtcaatggtacaggacctgctactgattggatgtct
gcagaaacatttgaaagtgatctagatgaaacgcgtgtccctgaggtgcccagttctctc
cacgtccgcccgctcatcactagtatcgtcgtgagctggactcctccagaaaatcagaac
attgtggtcagaggctacgcgatcggctatggcttgggcagccctcatgctcagaccatc
agagtggactacaagcagcgttactacacgattgagaacctggatccaagctcccactat
gtaattaccctgaaagcctttaataatgtgggtgaaggcatcccactgtatgagagtgca
gttaccagaccccatacagatacttctgaggttgatttatttgttgttaatgctccatac
actccagtgccagatcccacccctatgatgccaccggtgggagttcaggcttccatactg
agccatgacaccataaggattacgtgggcggacaactcactgccaaaacaccagaagatc
acagattcgcggtactacacagtccgatggaaaaccaatatccctgctaacaccaagtat
aagactgcaaacgcaacaactttgagttatttagtgactggactaaaaccaaacacgctt
tatgagttctctgtaatggtgactaaaggtcgaagatccagcacatggagtatgactgct
catggaaccacctttgaacttgttcctacttctccacccaaagatgtgacagtagtgagt
aaagaaggaaaacctaggaccataatcgtgaactggcagcctccttctgaagctaatggc
aaagttacaggctatatcatttactacagtacagatgtgaatgcagagattcacgactgg
gttattgaaccagtggtggggaacagactaactcaccagatccaggagttaacgcttgac
acaccatactacttcaaaatccaagcccgcaactccaagggcatggggccaatgtctgaa
gctgtccagtttcgaacacctaaagcggattcttctgacaaaatgcctaatgaccaagct
tcagggtcttcaggaaaaggaagcaggcctccagacacaggatctgattacaagcctccg
atgagtggtagtaacagtcctcatggaagtcccacctcccctctagacagtaacatgctc
ttggtcatcatagtctccattggtgtcctcaccattgtggtggtggtgatcatcgctgtg
ttctgcactcgtcgcaccacctcgcaccagaaaaagaaacgagctgcctgcaaatctgtg
aatggctcccataaatacaaaggaaattccaaagacgtcaaacctccagacctttggatc
catcatgagaggctagagttaaagcctattgataagtctccagacccaaacccaatcatg
actgacaccccaattccacgaaactcccaagatatcacccctgtggataattccatggac
agcaatatccatcaaagaagaaattcatacagagggcatgaatcagaagatagtatgtct
acactggctggaaggcgaggaatgagaccaaaaatgatgatgccttttgactctcagcca
ccccagcccgtgattagtgcccatcccatccattccctcgataaccctcaccatcatttc
cactccagcagcctcgcctctccgacccgcagccatctccaccttcagggcagcccatgg
cccattggcacatccttgtcccattcagacagggctaattctacagaatcagttcggaat
acccccagcaccgacaccttacctgcttcctcatctcagacgtgctgcactgaccatccg
gatcccgagggagccaccagctcttcctatttgtccagtgcccaggaagaaggctctggc
cccacccttcctacggcccatgtccgcccctcgcacccgctgaagagcttcgctgtgcca
gcagtcccatccccagggcccgccacctatgaccccgccttaccaagcacacctctgctg
tcccagcaagctcctaaccatcaccttcactcagtgaagacagcgtcgatcgggacgttg
gggagaagccggcctcctatgcctgtgattgttcccagtgcccctgatgtgcaggagacc
accaggatgctggacgactcagagagtggagtctctgctgctctcctccgggcgttcctt
aaggcaagaatgtcaaagcacaggccactaagggtgcaccatctggactgtctggcagaa
ataaatggccccagggggctgggtagtgcagtgggtaacgccctagccctggagttcaga
tccagcctcagatacctgacatgtattagcccagtgacctgggcaagtcacttaaccctg
attgcctcacatgaaaataaaataggataa
DBGET
integrated database retrieval system