Sarcophilus harrisii (Tasmanian devil): 100921928
Help
Entry
100921928 CDS
T02286
Name
(RefSeq) integrin alpha-D isoform X1
KO
K06594
integrin alpha D
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
100921928
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
shr04515
]
100921928
04090 CD molecules [BR:
shr04090
]
100921928
Cell adhesion molecules [BR:
shr04515
]
Integrins
Integrin alpha subunits
100921928
CD molecules [BR:
shr04090
]
Proteins
100921928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ITGAX-like_Ig_3
VWA
FG-GAP
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_1
FG-GAP_3
Integrin_alpha
FG-GAP_2
Motif
Other DBs
NCBI-GeneID:
100921928
NCBI-ProteinID:
XP_003761386
Ensembl:
ENSSHAG00000014262
UniProt:
G3WMV8
LinkDB
All DBs
Position
1:219479259..219505772
Genome browser
AA seq
1157 aa
AA seq
DB search
MAAGAVFLITVLASCHGFNLDIKHPIIFQKNVASFGQSVVQFKGSRLMVGAPLVRVSAKQ
TGRLYECKYDTRSCLPIPLQIPQEAVNMSLGLSLATGTNSSQLLVCGPTVHQTCGKNIYM
KGFCFVLDSKVQQCKTIPEALQECPKQENDIVFLIDGSASINSDEFQQMKSFVRAVIDQF
KETNTQFSLMQYSNLLKTHFTFADFQKSTDWGKLVDPILQLKGLTYTATAIRKVVTELFQ
SWNGARKNATKILIVITDGEKFKDELQYEDVIPLADQAGIIRYAIGVGDAFEYDKAREEL
SIIGSKPAKEHVFWVNNFGTLKNIQEQLQEKIFSIEGTESRSSISFQHEMSQAGFSAALT
SMGPVLGAVGSFDWSGGVFLYSPNQDPVFIKTSKEDMHDAYLGYSAMVAIWNGVQKLVLG
APRYQHTGKVVVFTNVGGTWEQETEVKGTQVGSYFGATLCSIDVNSDNNTDLILIGAPYY
YEQNRGGQVYICPFSQQRDKWNCEVVLHGQQGYPFGRFGAALAIAGDTNGDKITDVVVGA
PGEEENQGAIYLFHGVSESGFKPSYSQRISGSHLSPTLQYFGQSLSGGQDLTQDGLVDVA
VGAQEHVLLLRTCPILRLEVSITFTPPELARSVFECWGQKAINREAGTAIICFTISKSTP
DHLGDVSSSVAYDLALDAGRLSPRAIFAETKNWTLNRIKTLGLGNYCENVKLLLPYCVED
SVNPISLRLNFSLVGQHISSSENLRPVLEVGSQDLFTSHFPFEKNCGTDNFCEDDLDITF
NFSGLQILVVGSNLELNVTVTVTNQGEDSYRTMVTFLYPPGLSYRKVSITHNWHPQQSGR
IACEAAMPENKALKSTGCSINHPIFQEGAKVTFVATFDISPTATLGDKMLMKTKVSSENN
TPKSNKTTFQLEVPVKYAIYLVISSKEESTKYLNFSTSEEKKSQEVKHKYQVNNLSKQNL
PSSINFWVPVELNKMIVWNVTTVNSPQKISCVSERNPPRYFDFQTQIQTSPVLDCSIAVC
LKIRCDISSFGVQEELDFTLKGNLSFGWVSQTLQKKLIVRSSAEIIFNESVYYQLQGQEA
FLKSQTETVLEQYEIHIPILLIAGSTVGGLLLLVLITVGLFKLGFFKRHYKEMIEKNIQS
IQFSNEDSFTDDLPTLK
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atggcagctggtgctgtattcctgatcacagtcctagcctcttgtcatggattcaacctg
gacatcaaacatcccattatcttccagaagaatgtagctagttttgggcagagtgtagtc
cagtttaaaggctctcggctcatggtgggagctcctttggtaagggtttctgccaaacaa
accgggagactctatgagtgtaaatatgacactagaagttgtctacccatccctttacag
atcccccaggaggcagtgaacatgtcccttggactctctctggctactggtacaaactct
tcacaactactggtctgtggacctacagtacaccaaacctgtgggaagaatatatacatg
aagggtttttgttttgtgctggattcaaaggtacaacaatgtaagacaattccagaagcc
ctacaggagtgtccaaagcaagaaaatgacattgtctttttgattgatggctctgccagc
attaattccgatgagtttcagcaaatgaagagttttgtcagagctgtaattgaccagttc
aaagaaaccaacacacagttctcattgatgcagtattcaaacctacttaaaacacatttt
acttttgctgacttccaaaagagcaccgactggggaaagcttgtggatccaattttgcag
ctgaagggtttgacctacactgccactgccatcagaaaagtagtaactgaattgtttcaa
agctggaatggagctcggaagaatgccactaagatcctcattgtaatcacggacggagag
aaattcaaagatgagctacaatatgaagatgtcatccccctagcagaccaggcaggaatt
atccgatatgcaattggggtgggagatgcttttgaatatgacaaagcccgggaggaactg
agcataattggatcaaaacctgcaaaagagcatgtgttctgggtgaataacttcggtact
cttaagaacatacaggaacagcttcaagagaagatcttttctattgagggaactgaatct
agaagcagtatctccttccaacatgagatgtctcaggcaggcttcagtgctgcccttaca
tctatgggaccagtcctaggagctgtggggagttttgactggtctggaggtgtcttctta
tactccccaaatcaagatcctgtctttatcaagacatccaaagaagacatgcatgatgct
tatctgggttattctgctatggtagccatttggaatggagttcagaaacttgtcctgggg
gcccctagataccagcacacaggaaaggttgtagtcttcaccaatgttggtggcacctgg
gagcaggagactgaagtcaaagggacacaggtaggatcctattttggagcaaccctgtgt
tccattgatgtgaacagtgataacaacaccgacctgatcctcattggagccccctattat
tatgaacaaaaccgaggaggccaggtgtacatttgtcccttttctcagcagagggacaaa
tggaactgtgaagttgttctccatgggcagcaggggtatccttttggacgttttggagca
gcactggcaatagcaggggatacaaatggggacaaaataacagatgtagtagtgggtgca
cctggggaggaagaaaaccaaggagccatctatctgtttcatggtgtgtctgaatctggt
ttcaagccttcctatagccagagaattagtggctcccacctttcccccacacttcagtat
tttggacagtcactgagtgggggacaagacctcactcaggatggacttgtggatgtggca
gtgggagcccaggaacatgtgttgctgctcaggacatgtccaatactgagacttgaagta
tcaataacattcacacctccagagttagcaagatctgtatttgagtgttggggacaaaag
gccatcaacagagaagcaggaactgctataatctgctttactatttctaaaagtactcca
gatcatctgggtgatgtctctagctctgtggcttatgaccttgctctggatgctgggcgg
ctgagtcctcgtgccatatttgctgaaacaaagaactggacattaaatagaattaaaact
ctgggtctggggaattactgtgagaatgtgaaattgttgttaccatattgtgtggaggac
tcagtgaaccccatcagtcttcgcctcaacttctctctggtgggacaacatatctcttca
tctgagaacctcagacctgttctagaagtgggttcccaggacctctttacctcccatttc
ccctttgagaagaactgtggaacagataacttctgtgaggatgaccttgacattacattt
aatttctctggtttacagatcctggtggttgggagtaacctggaattgaatgtgacagtg
acagtgacaaatcaaggggaagattcttacaggaccatggttaccttcttatatccccca
ggactgtcctatcgaaaagtgtcaataactcataattggcaccctcagcaatctggacgt
attgcatgtgaggcagcaatgcctgagaacaaggccctgaagagtactggctgcagcatc
aatcaccccatcttccaagaaggagctaaggtcacttttgtagcaacatttgatatctct
cccactgccactcttggagataagatgctcatgaaaactaaagtgagcagcgaaaataac
acacctaaatccaacaaaaccacattccaactggaagtaccggtgaagtatgctatctac
ttggtgatcagcagcaaggaagaatctactaagtacttaaatttctctacttctgaggag
aagaaaagccaggaggtcaagcacaaataccaagtgaacaacctgagtaagcagaatctg
ccaagcagcattaatttttgggttcctgtggaactaaataaaatgattgtatggaatgtg
accacagtcaactccccccagaagatttcgtgtgtctcagaaaggaatccccccaggtat
tttgacttccagacccagattcagacaagccctgttctggactgttccattgcagtttgc
ctcaaaattagatgtgatatctcttcttttggtgtccaagaagaacttgacttcactctc
aaaggcaatctcagctttggctgggtcagccaaacactgcagaagaagctgatagtcaga
agctctgctgaaatcatttttaatgaatcagtatattaccaacttcaaggacaggaggcc
tttttgaaatcccagacagaaacagtcctggagcaatatgaaattcacattcccatcctt
cttattgctggcagtacagtggggggacttctcctgctggtgctcataacagttgggctc
ttcaagcttggcttcttcaaacgtcactacaaagaaatgatagagaaaaacatccagagt
atccagttcagcaatgaggactccttcacagatgatttgcctacactaaagtaa
DBGET
integrated database retrieval system
