Sarcophilus harrisii (Tasmanian devil): 100924947
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Entry
100924947 CDS
T02286
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100924947 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shr03021
]
100924947 (SMARCA5)
03036 Chromosome and associated proteins [BR:
shr03036
]
100924947 (SMARCA5)
Transcription machinery [BR:
shr03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
100924947 (SMARCA5)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
100924947 (SMARCA5)
RSF complex
100924947 (SMARCA5)
WICH complex
100924947 (SMARCA5)
B-WICH complex
100924947 (SMARCA5)
NORC complex
100924947 (SMARCA5)
BRF complex
100924947 (SMARCA5)
NuRF complex (fruit fly)
100924947 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
Motif
Other DBs
NCBI-GeneID:
100924947
NCBI-ProteinID:
XP_031799012
Ensembl:
ENSSHAG00000008464
LinkDB
All DBs
Position
6:68451066..68494626
Genome browser
AA seq
1050 aa
AA seq
DB search
MSSAAEPPPPPPSLPSAETVPGAPAVPAPGGGGNHNKSGVESAPAPAAQPAGDAEMEDVF
DDASPGKQKEIQEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKP
GRPRIKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRD
YQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLH
NWMNEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNW
RYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSA
DDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQRE
WYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNS
GKMVVLDKLLPKLKEQDSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSI
NAYNEPNSSKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTV
RVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATHVF
ASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYREK
QKMAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLF
ELLEKEILYYRKTIGYKVPRNPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQGF
TNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMA
QIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKL
GFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEKAE
KKKRGPKPSAQKRKMDGAPDGRGRKKKLKL
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgcggccgagccgccgccgcccccgccgtcgctgccatccgcggagaccgtg
cccggggccccggccgtgcccgcccccggcggcggcggcaatcacaacaaaagcggcgtg
gagagcgccccggccccggccgcccagcctgcgggcgacgcggagatggaggatgtattt
gatgatgcatctccagggaaacaaaaggaaatccaagaaccagatcctacctatgaagaa
aaaatgcaaactgaccgagcaaacagatttgagtatttgttaaagcagacagagctgttt
gcacatttcatccagcctgctgctcagaagactccaacttcaccactgaagatgaaacca
ggacgtccaagaataaagaaagatgaaaaacagaatttgctgtcagttggcgactacagg
catcgtcgaacagaacaggaggaagatgaggagctgttaactgaaagctccaaggctacc
aatgtgtgcactcggtttgaggactccccatcatatgtaaaatggggtaaactgagagat
tatcaggtccgtggattaaattggttgatatctttgtatgagaacggaatcaatgggatt
cttgcagatgaaatgggcttgggaaagacactgcaaacaatttctcttcttggatatatg
aaacactatagaaatattcctggccctcatatggtattggttccaaagtctactttacat
aactggatgaatgaattcaagagatgggtaccaacgcttagatcagtttgtttgataggt
gataaagaacaaagagctgcctttgtcagagatgtattattaccaggagagtgggatgta
tgtgtaacatcatatgagatgctcattaaagagaagtctgtttttaaaaaatttaattgg
agatacttagtcattgatgaagctcacagaatcaaaaatgaaaaatccaagttgtcagaa
attgtaagagaattcaagactacaaatcgactactcctaacaggaacacctcttcagaat
aacttacacgaactctgggcgcttctcaactttttgttgccagatgtttttaactcagca
gatgattttgattcatggtttgacacaaataactgccttggggatcagaagctagttgaa
cgtctccatatggttttgcgcccatttctccttcgtcgaattaaggctgatgttgaaaaa
agtttacctccgaaaaaggaagttaaaatttatgtgggtcttagcaaaatgcaaagggaa
tggtatacacggatactaatgaaggatatagacatattaaattccgcaggaaaaatggac
aaaatgagactcttgaatatcctaatgcaattgaggaaatgttgcaatcatccatatctc
tttgatggagctgaacctgggccaccttacacaacagatatgcatctggttaccaatagt
ggcaaaatggttgtactagacaaacttcttcctaagttaaaagagcaagattcaagagta
ctaatcttcagtcagatgacaagagtattagacattttggaagattactgcatgtggaga
aactatgaatactgcaggttggatggacaaactcctcatgatgagagacaagattccatc
aatgcatacaatgaaccaaacagctccaagtttgtttttatgttaagtacacgtgctggt
ggtcttggaataaatcttgctactgctgatgttgtgatcttatatgattcagactggaat
ccacaagttgatcttcaggctatggatcgagcacacagaattggacaaaccaagactgtt
cgagtattcaggtttatcactgataatactgtggaggaaagaatagtggaacgtgcagag
atgaaacttaggttggattcaatagtcattcagcaaggaaggcttgtagatcaaaatctg
aacaaaattgggaaagatgaaatgctacagatgattcggcatggtgcgacacatgtcttt
gcctcaaaggagagtgaaattactgatgaagatattgatggtattttggagagaggtgca
aaaaagactgcagaaatgaatgaaaagctctccaagatgggtgagagttcactgagaaat
ttcacaatggatacagagtctagtgtgtataactttgaaggtgaagactacagagaaaaa
cagaagatggcattcacagagtggattgagccacctaagcgagaaagaaaagccaattat
gctgtggacgcgtacttcagggaagccctccgagtcagtgagcccaaagcacccaaggct
cctcgacctccaaaacaacccaatgttcaggatttccagttctttcctccacgtttattt
gaattattggaaaaagaaattttgtattacaggaaaacaattggatataaggtacctcgg
aatcctgacctaccgaatgcagcccaagcacaaaaagaagaacagctaaaaattgatgaa
gcagaacccctcaatgatgaagagctggaagaaaaagagaaacttctgacccagggattt
accaactggaataagagagactttaaccagttcatcaaagctaatgagaaatggggccgt
gatgacattgagaacatagctagagaggtagaagggaaaacaccagaagaagtcattgag
tattcagctgtattctgggaacgatgcaatgaacttcaggatatagaaaagatcatggcc
cagattgaaaggggagaagcacgaatacagaggagaattagtatcaaaaaagcacttgat
acaaagattggccgatacaaagcaccttttcaccaactgaggatatcgtatggtactaac
aaaggaaagaactacactgaggaagaggatcgatttctcatttgtatgcttcacaagctt
ggctttgataaggaaaatgtgtatgatgaattgcgacaatgtattcgaaactctcctcag
ttccgatttgactggttcctcaagtccaggacagcaatggagcttcagaggaggtgtaac
acattaattactctgattgaaagagaaaacatggaattagaagaaaaagaaaaggctgag
aaaaagaaacgaggaccaaagccttcggcacagaagcgtaaaatggatggagcacctgat
ggtcgaggaagaaaaaagaagctaaagctatga
DBGET
integrated database retrieval system
