Sarcophilus harrisii (Tasmanian devil): 100925240
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Entry
100925240 CDS
T02286
Symbol
CACNA1A
Name
(RefSeq) voltage-dependent P/Q-type calcium channel subunit alpha-1A isoform X1
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04010
MAPK signaling pathway
shr04020
Calcium signaling pathway
shr04721
Synaptic vesicle cycle
shr04723
Retrograde endocannabinoid signaling
shr04724
Glutamatergic synapse
shr04725
Cholinergic synapse
shr04726
Serotonergic synapse
shr04727
GABAergic synapse
shr04728
Dopaminergic synapse
shr04730
Long-term depression
shr04742
Taste transduction
shr04930
Type II diabetes mellitus
shr05017
Spinocerebellar ataxia
shr05032
Morphine addiction
shr05033
Nicotine addiction
shr05207
Chemical carcinogenesis - receptor activation
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100925240 (CACNA1A)
04020 Calcium signaling pathway
100925240 (CACNA1A)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
100925240 (CACNA1A)
04727 GABAergic synapse
100925240 (CACNA1A)
04725 Cholinergic synapse
100925240 (CACNA1A)
04728 Dopaminergic synapse
100925240 (CACNA1A)
04726 Serotonergic synapse
100925240 (CACNA1A)
04730 Long-term depression
100925240 (CACNA1A)
04723 Retrograde endocannabinoid signaling
100925240 (CACNA1A)
04721 Synaptic vesicle cycle
100925240 (CACNA1A)
09157 Sensory system
04742 Taste transduction
100925240 (CACNA1A)
09160 Human Diseases
09161 Cancer: overview
05207 Chemical carcinogenesis - receptor activation
100925240 (CACNA1A)
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100925240 (CACNA1A)
09165 Substance dependence
05032 Morphine addiction
100925240 (CACNA1A)
05033 Nicotine addiction
100925240 (CACNA1A)
09167 Endocrine and metabolic disease
04930 Type II diabetes mellitus
100925240 (CACNA1A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shr04040
]
100925240 (CACNA1A)
Ion channels [BR:
shr04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
100925240 (CACNA1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
100925240
NCBI-ProteinID:
XP_031803518
Ensembl:
ENSSHAG00000013591
LinkDB
All DBs
Position
1:complement(649173794..649415655)
Genome browser
AA seq
2379 aa
AA seq
DB search
MILATIIANCIVLALEQHLPDEDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFAFHKG
SYLRNGWNVMDFVVVLTGILATVGTEFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKA
MIPLLQIGLLLFFAILIFAIIGLEFYMGKFHTTCFEEVTDDIQGESPAPCGTEEPARTCP
NGTKCKPYWEGPNNGITQFDNILFAVLTVFQCITMEGWTDLLYNSNDASGNTWNWLYFIP
LIIIGSFFMLNLVLGVLSGEFAKERERVENRRAFLKLRRQQQIERELNGYMEWISKAEEV
ILAEDETDGEQRHPFDVGALRRATIKKSKTDLLNPEEAEDQLADMASVGSPFARASIKSA
KLENSTFFHKKERRMRFYIRRMVKTQAFYWTVLSLVALNTLCVAIVHYNQPDWLSDFLYY
AEFIFLGLFMSEMFIKMYGLGTRPYFHSSFNCFDCGVIIGSIFEVIWAVVKPGTSFGISV
LRALRLLRIFKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFN
FDDGTPPTNFDTFPAAIMTVFQILTGEDWNEVMYDGIKSQGGVKGGMVFSIYFIVLTLFG
NYTLLNVFLAIAVDNLANAQELTKDEQEEEEAANQKLALQKAKEVAEVSPLSAANMSIAM
KEQQKNQKSSKSVWEQRTSEMRKQNLLASREALYNELGPEERWKVSYGRHMRPDIKTHLD
RPLVVDPQENRNNNTNKSRPSDPSMDQRLSQQRAEDFLRKQARYYDRTRGGYERADSGGL
EPRRQRSSSKEADLNHEGSYGREPEYQTKERDGNQDRGFREGDPERSKPGDPHRRHQHRQ
GGSKESRSGSPRTGEGEREPRRHRAHRRPGEEGTEDSNKSERRYRHREGSRPSRAGDGEN
EPPDGDRRRRHRHTTPAYDNDLKREDKERRHRRRKENQGSGVPVSGPNLSTTRPIQQDMG
RQDPPLAEDIDNIKNNKLATTESTNPHNTIHALHPQNPAQMGNHTNSPPMRPPSSQPAGN
PSNPGPPKNPENSLIVTNPSTQNNPAKTAKKPEHTAVDIPPAFPQPVNNTVVQVNKNANP
DPLPKKEEEKKEEDDSGEDGPKPMPPYSSMFILSTTNPLRRLCHYILNLRYFEMCILMVI
AMSSIALAAEDPVQPNAPRNNVLRYFDYVFTGVFTFEMVIKMIDLGLVLHQGAYFRDLWN
ILDFIVVSGALVAFAFTSTARGNSKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCV
VNSLKNVFNILIVYMLFMFIFAVVAVQLFKGKFFHCTDESKEFEKDCRGKYLLYEKNEVK
ARDREWKKYEFHYDNVLWALLTLFTVSTGEGWPQVLKHSVDATFENQGPSPGYRMEMSIF
YVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEEYSLEKNERACIDFAISAKPLTRHMPQ
NKQSFQYRMWQFVVSPPFEYTIMAMIALNTIVLMMKFDGATSAYDNALRVFNIVFTSLFS
LECLLKIMAFGILNYFRDAWNIFDFVTVLGSITDILVTEFGDPNNFINLSFLRLFRAARL
IKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIGIDVEEEDDDE
DFQITEHNNFRTFFQALMLLFRSATGEAWHNIMLSCLSGKPCDKNSGIREPECGNEFAYF
YFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRVWAEYDPAACGRIHY
KDMYSLLRVISPPLGLGKKCPHRVACKRLLRMDLPVADDNTVHFNSTLMALIRTALDIKI
AKGGADKQQMDAELRKEMMAIWPNLSQKTLDLLVTPHKSTDLTVGKIYAAMMIMEYYRQS
KAKKLQALREEQNRTPLMFQRMEPPSPTQEGGPGQNALPSSQLDQGLMAHEGGMKESPSW
VTQRAQEMFQKTGTWSPERGPPDDLPNSRPSSQSVEMREMGKDGYSDSDHYLPMEGQGRA
TSMPRLPAENQRRKGRPRGNNLSTISDTSPMKRSASMLGHKGRRLDDYSLERITPEENQR
HHQRRRERGHRTSERSLSRYTDVDTGLGTDLSVTTQSGDLPSKDRDQERGRPKDRKHHQH
HHHHHHHHPSSDKERYSQERSEYGRPRARDQRWSRSPSEGREHMAHRQGSSSVSGSPVPS
TSGTSTPRRGRRQLPQTPSTPRPHVSYSPVIRKAGSAGPQPPQPQQSVRPCRSSTPGPRR
YQAPSAEHQVGERPSGGGHGSSRSPGMERHATAPPRNESPRAYRHAGSRWPAPSPHTSEG
HSGARHHSGYYQSSDYDADGPGSEEVAFTYDTPPHASSGTGRSPRTSRAGGPASVSPSRH
GRRLPNGYYPTHGLARHRGQGPRKGLHEPYSETDDDDWC
NT seq
7140 nt
NT seq
+upstream
nt +downstream
nt
atgattttagccaccatcatagcaaactgcattgtacttgctcttgagcagcatctgcct
gatgaggacaagacgccgatgtctgaacgcctggatgacacagaaccatatttcattgga
attttttgttttgaggctggaattaaaatcatcgccttagggtttgctttccacaaaggc
tcttacctaaggaatggctggaacgtaatggattttgtggtggtgctaacaggcattctg
gcaacagttggcacagaatttgacctacggaccctgagggcagtgcgtgtcctgaggccc
ctaaagctggtatctggaatcccaagtttacaagttgttctgaagtccatcatgaaggcg
atgatacctttgctacagattggcctcctcctgttttttgcgatccttatttttgcaatc
atagggttagaattttatatgggaaaatttcataccacctgctttgaggaggtaacagat
gatattcagggtgagtctccagctccatgtggaaccgaggaacccgcccgtacctgcccc
aatgggaccaaatgcaagccctactgggaaggacccaataatgggatcactcagttcgac
aatatcctgtttgcagtgctgactgtcttccagtgtatcaccatggaagggtggactgac
ctcctctacaatagcaatgatgcctcagggaacacctggaactggttgtacttcattccc
ctcatcatcattggctccttttttatgctgaaccttgtgctgggtgtgctgtccggggag
tttgccaaagaaagagagcgggttgagaatcggcgagcttttctgaagctgagacggcag
caacagatagagagggaactcaatggctacatggaatggatctccaaagcagaagaagtg
atactagcagaagatgaaacagacggcgagcagagacatccctttgatgttggagctctg
cggagagccaccataaagaaaagcaagacagacctgctcaaccccgaagaagccgaggat
cagctggctgacatggcctcagtgggttctcccttcgctagagccagtattaaaagtgcc
aagctggagaactcgactttttttcataaaaaggagaggaggatgcgcttctatatccgc
cgcatggtcaaaactcaggccttctactggacagttctcagtctggtagctctcaacacg
ctgtgtgttgctatagttcactacaaccagccagattggctatctgacttcctctactat
gcagaattcattttcttaggactctttatgtccgaaatgtttataaaaatgtatgggctt
ggaacgaggccttattttcactcctccttcaactgctttgactgtggggttatcattggg
agcatttttgaggtgatctgggctgtggtgaaacctggaacatcctttgggatcagtgtg
ctaagagctctcaggttattgcgtattttcaaagtcacaaaatactgggcttctctcagg
aacctggtcgtgtctctcctgaactccatgaaatccatcatcagcttgttattccttctc
ttcctcttcatcgttgtgtttgcccttttggggatgcagctctttggaggccaattcaat
tttgatgatggaacgcctcctaccaattttgacacttttccagcagcaataatgacagtg
tttcagatcttgactggagaagactggaatgaggtgatgtatgatggcatcaaatctcaa
gggggtgtcaaagggggcatggtgttctccatctatttcattgtgctgacactctttggg
aattatactctactgaacgtgttcttggctatcgcggtggataatctggccaacgctcag
gagctcactaaggatgaacaagaagaggaagaggcagccaaccaaaagcttgccttacaa
aaagcaaaggaagtggcagaagtgagtcctctgtctgcagccaacatgtccatagccatg
aaagaacagcagaaaaaccaaaaatcctccaagtcagtgtgggagcagagaacaagcgag
atgcggaaacagaacctgctggctagccgggaggctctctacaacgagctgggccccgag
gagagatggaaagtctcctatggccgacacatgaggcctgacattaagactcacctggac
aggcccctggtggtggacccacaggaaaaccgcaacaataataccaacaagagcagaccc
agtgatccctccatggaccagcggctcagccagcagcgcgctgaagacttcctcaggaag
caggcccgctactatgaccggacacggggaggctacgagcgggccgattcagggggcctg
gagccccggaggcagaggagcagcagcaaagaggctgacctgaaccatgaggggtcatat
gggagggagcccgagtaccagaccaaggaacgcgacgggaaccaggatcggggctttcgg
gagggagacccagaacggagcaaacctggggatccccatcggaggcaccagcaccggcag
gggggcagcaaagagagccgcagcggctctccccggacgggcgagggggagcgggagccc
cggagacaccgggcccatcggcggccgggcgaggaaggcaccgaggacagcaataagtca
gagaggcggtatcgccaccgagagggcagccggcccagccgagcaggcgacggggagaat
gagcctccagatggggaccggcggcgccgacaccgccacaccacccctgcctacgacaac
gacctcaagagagaagacaaggagaggaggcaccggcggaggaaagagaaccaaggttct
ggggtccctgtgtctggcccaaacctgtccaccactaggccaatccagcaggatatgggg
cgtcaggatcctccactggcagaagacattgataatattaagaacaataagttggctacc
acggaatccaccaatcctcacaataccatccatgctctccacccccagaacccagcccag
atgggtaaccacaccaattccccacccatgcggcccccatccagtcagccagctggaaac
ccatccaaccctgggccccccaaaaacccagagaacagccttatagtcaccaaccccagc
actcagaacaacccagccaagactgccaagaagcctgagcacacggcggtggatatcccc
cccgcctttccccaacctgtcaacaacactgttgtccaagtaaacaaaaacgccaaccca
gacccactgccaaaaaaggaggaagagaagaaagaagaggatgattcaggagaagatggt
cccaaacctatgcccccctacagttccatgttcatcttgtccaccacaaaccccttacgc
cggttgtgccactatatcttgaaccttcgatattttgagatgtgcattctgatggtgatc
gccatgagcagtatcgccctggcagctgaagaccctgtgcagcccaatgcccccaggaac
aatgtgctgcgatattttgattatgtctttactggtgtctttacctttgagatggtgatc
aagatgatcgacttagggctggttctccaccaaggagcatactttcgggacctctggaac
atcttagattttattgtggtcagtggggctctggtagcatttgccttcacgagtactgca
cgtggcaatagtaaagggaaggatatcaacacaattaaatcccttcgggtcctccgagtg
ctgcggcctctcaaaactatcaaacgactgccaaaactcaaggccgtgtttgactgtgtg
gtgaattctctcaaaaacgtcttcaacatcctcatcgtctacatgctcttcatgttcatc
tttgctgtggtggccgtgcagcttttcaagggcaagttcttccactgcacagatgagtcg
aaggagtttgagaaagattgccggggcaagtatctcctgtatgagaaaaatgaggtgaaa
gccagggatcgggaatggaaaaagtacgagtttcattacgacaatgtgctgtgggctttg
ctgacccttttcaccgtgtccactggagaaggctggccacaggttctcaaacactcagtg
gatgcaacttttgagaaccagggtcccagccctggataccggatggagatgtccatcttc
tatgttgtctacttcgtggtgtttccattcttctttgtgaacatctttgtggccttgatc
atcatcaccttccaggagcagggagacaagatgatggaagagtacagcctggagaagaat
gagagggcatgcattgactttgccatcagtgccaaacccctgacaaggcacatgcctcag
aacaagcagagtttccagtaccgcatgtggcagtttgtggtgtcccctccctttgaatac
acaatcatggccatgatagccctcaacacaattgtacttatgatgaagtttgacggtgcc
acatctgcgtatgacaatgcactaagggtgttcaacattgtcttcacttccctattttct
ttggaatgtctcctgaaaatcatggcatttgggatcctgaattatttccgggatgcctgg
aatatctttgattttgtgacagttctgggcagtatcactgatattttagtgaccgagttt
ggggatccgaacaactttatcaacctcagcttcctccgcctcttccgggccgcccgtctc
atcaagctacttcgccagggttatactattcgcatactcctctggacctttgtacagtcc
ttcaaggctctcccctatgtctgccttctgatcgccatgctgttcttcatctatgccatc
atagggatgcaggtgtttggtaacatcggcattgatgtggaagaggaagacgacgatgaa
gatttccaaatcacagagcacaacaacttccgcaccttcttccaggctctgatgctcctt
ttcaggagtgccacaggtgaggcctggcataacatcatgctgtcctgcctcagtgggaag
ccctgcgataagaactcgggcatcagggagcctgagtgtgggaacgagtttgcctatttt
tattttgtgtctttcatcttcctctgttctttcctgatgctgaacctctttgtggctgtc
atcatggacaattttgagtatctcacccgagactcttccatcctgggcccccaccacctg
gatgagtatgtgcgtgtctgggccgaatatgatcctgcagcttgcggtcggattcattat
aaggatatgtacagtttattgcgtgttatatctccccctctcggcttaggcaagaaatgt
cctcatagggttgcttgcaagagacttttgcgaatggatttgcctgttgcagatgacaac
acagttcatttcaactctactcttatggccctgatccggacggccctagacattaaaatt
gccaaaggcggagctgacaaacagcagatggatgctgagttacggaaggagatgatggct
atttggcccaacctttcacaaaagacacttgacctcctcgtcaccccgcacaaatccaca
gacttgacagtgggaaagatatatgcagccatgatgatcatggagtattaccgacagagc
aaggcaaagaagctacaggccctgagggaggagcagaaccggacgccgctgatgtttcag
cgcatggagccaccatccccgactcaggagggtggccctggtcagaatgccctcccctct
tcccagctggaccaagggctgatggcccatgaaggtggcatgaaagagagtccatcctgg
gtgacccaacgtgcccaagagatgttccagaagacagggacatggagccctgaacgagga
cctcctgatgatctacctaacagccggcccagttctcagtctgtggagatgagagagatg
gggaaggacggctactcagacagcgaccactacctccctatggaagggcagggcagagcc
acctccatgccccggctcccagctgaaaaccagaggagaaagggccggcctcgtgggaat
aatctgagtaccatctctgataccagtcccatgaagcgctcggcttccatgctgggccac
aagggcaggcgcttggatgactactctctggaaagaatcactccagaggagaaccagcgg
caccaccaacggcgtcgtgagcggggccaccggacatcagagcgctccctgagccgatac
acagacgtggatacaggcttaggaacagacctgagtgttaccacccagtctggggatctg
ccttcaaaagatcgagaccaggagcggggaaggcccaaggaccgaaaacaccatcagcac
catcatcaccaccaccatcaccacccatcctctgacaaggagcgctattcccaggagcgg
tctgagtacggacggccccgagcccgagaccaacgctggtctcgttcccccagcgagggc
cgagagcatatggctcataggcagggcagtagttccgtaagtggaagcccagtcccctca
acatctggtaccagcacaccgcggcgtggacgccgccagctcccccagaccccctccacc
cccaggccacatgtgtcctattccccagtgatccgtaaggctggcagcgcaggtccccag
ccgccgcagccgcaacagtcagtgcgcccctgcagatcctccactcctggaccacggagg
taccaggccccctctgctgagcaccaggtgggggaacggccctctggagggggccacggc
agtagccgctcaccgggaatggagcggcacgccactgccccaccaagaaatgaatccccg
agggcttaccgccatgctgggtcccggtggccagcaccgagcccccatacctcagagggg
cactcgggagcccggcaccacagcggctactaccagagctcagactacgacgccgacggc
ccagggagcgaagaggtagccttcacttatgacaccccgccacatgcctcctctggtacc
gggcggtcgcccaggacttcccgggcaggaggcccagcctcagtctcgccctccagacac
ggacggcgattaccaaatggctactatcctacccacggactggccaggcatcgagggcaa
ggcccccggaaaggactgcacgaaccctatagcgagaccgatgatgatgactggtgctaa
DBGET
integrated database retrieval system