Sarcophilus harrisii (Tasmanian devil): 100925807
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Entry
100925807 CDS
T02286
Symbol
RAPGEF3
Name
(RefSeq) rap guanine nucleotide exchange factor 3 isoform X1
KO
K08014
Rap guanine nucleotide exchange factor 3
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04015
Rap1 signaling pathway
shr04024
cAMP signaling pathway
shr04072
Phospholipase D signaling pathway
shr04261
Adrenergic signaling in cardiomyocytes
shr04670
Leukocyte transendothelial migration
shr04720
Long-term potentiation
shr04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
100925807 (RAPGEF3)
04072 Phospholipase D signaling pathway
100925807 (RAPGEF3)
04024 cAMP signaling pathway
100925807 (RAPGEF3)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
100925807 (RAPGEF3)
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
100925807 (RAPGEF3)
09156 Nervous system
04726 Serotonergic synapse
100925807 (RAPGEF3)
04720 Long-term potentiation
100925807 (RAPGEF3)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
100925807
NCBI-ProteinID:
XP_031793911
Ensembl:
ENSSHAG00000005360
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All DBs
Position
5:95782732..95813171
Genome browser
AA seq
876 aa
AA seq
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MVLRKIHRPWSCSYQLQLEHRTPPSRIQGLRWTPLTNSNETLDFHVNLEQATSEHVLRAG
KLLHRHLLATFPTLIRDRKYHLRLYRQCCSGKELVDGVLALGLGVQSRNQAMGICQVLLN
EGALCHVKHEWAFHDRDTHFYRFPGPETDPDNIQEMEELAEAVTLLSQRGPDALLTVALR
KPPGQRTEEELDLIFEELLHIKAVAHLSNSVKKELAAVLLFEPSSKAGTVLFSQGDKGTS
WYIIWKGSVNVVTHGKGLVTTLHEGDDFGQLALVNDSPRAATIILREDNCQFLRVDKQDF
NRIIKDVEANTMRLEEHGKVVLVLERTPQSNGPDCSLNPGRNRYTVMSGTPEKILELLLE
AVRPDSSAHDPTETFLGDFLLTHSVFMPSAHLCAALLHHFHAEPAGGTEQEHGIYICNKR
QKILRLVSQWVTLYGPLLHIDPVAPSFLQKLSELVNRDTQLISLLREQGPERRRHCGLEN
GGGNMSPQLKDRTIPIWFPSYDDHFLSNRYAIQALDKVPYDICRLDHSILTLHLPVTASV
REVMNTLAQEDGWTQGQVLVKVTSSGAIASPTDTISLQPDARGVATSLRLNERLFIVNPQ
EMHKLTPHPDQLGPNVGSAEMLDLLSAKDLANQLTDHDWNLFKSIHQQLRNATTANLERF
MRRFNELQYWVATELCLCPVPGLRTQLLRKFIKLASHLKEQKNLNSFFAIMFGLSNSAIS
RLALTWERLPHKVRKLYSALEQLLDPSWNHRVYRLALTKLSPPIIPFMPLLLKDMTFIHE
GNHTLVDSLINFEKMRMMARTVRILHHCRSHSSAPLSPLRNRVSHIHEDSQAVKIYTCSE
QSLSARNLASARAYIQQLKVIDNQQELSRLSKELEP
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggtgttgagaaagattcatcggccctggagttgttcttaccagctgcagctagagcac
aggacaccccccagccggattcagggtttgcgctggacaccactaactaatagtaacgag
acgctggactttcatgtgaacctggaacaggctacttcagagcatgtgcttagggctggg
aagctgctgcataggcatcttctggctacctttcctaccctcatacgggatcggaaatat
cacctcagattgtatcggcaatgctgctctgggaaagagctggttgatggagtcttggcc
ctagggcttggagttcagtcccgaaatcaggctatgggcatctgtcaagttctcctgaat
gagggagccctttgccatgtgaaacatgagtgggccttccatgaccgagatactcatttc
tatcgattccctgggccagagacagacccagataacattcaagaaatggaggagctggct
gaggctgtgacactgctctctcagcgaggacctgatgctctgctcactgtggcgctgcgt
aagccccccgggcagcgcacagaggaagagctagacctaatctttgaggagctgctccat
atcaaggccgtggctcatctgtccaactcggtaaagaaggagttggctgctgtgttgttg
tttgagccaagcagcaaagcaggcactgtgttgttcagccaaggagataaggggacctct
tggtacattatttggaagggatctgttaatgtggtgacccatggcaagggcctggtgaca
accctgcatgaaggagatgactttggacagctagctttggtgaatgactcgccccgagca
gccaccatcattcttcgtgaagataactgtcagtttttgcgggtggacaaacaagacttc
aaccgtatcatcaaggatgtggaggcaaatacaatgcgtttggaagaacatggaaaagta
gtactggtgctggagaggacccctcagagcaatggccctgactgttccctgaatccaggc
aggaaccggtatacagtgatgtcaggcactccagaaaaaatcttggaactgctgctggag
gctgtgcggccagactcgagtgcccatgatcccacagagacattcctgggtgactttctc
ttgacccacagtgtcttcatgcccagtgcccatctctgcgctgctctgctgcatcacttc
catgcggagccagccggtggcactgagcaggaacatggcatttatatctgtaacaagcgg
cagaagatcctaaggctggtcagccaatgggtgaccctgtatggccccctgctccacata
gacccagtagccccaagcttcctacagaaactctcagaactggtaaacagggatactcaa
ctcatcagcctgctaagggagcagggaccagagagacggcggcactgtgggttagaaaat
ggcggtggaaatatgtcaccacaattaaaggatcgaacgattcccatctggtttcctagc
tatgatgatcacttcctcagcaatagatatgctatccaagctctagacaaagtcccctat
gacatctgccgactagaccactcaatcctgacactgcatctaccagtaacagcttctgtg
agagaagtgatgaacacactggcacaggaggatggttggacacaaggccaggtgctggtg
aaggtcacctcttcaggcgccatagcttctcccacagacaccattagtctacaaccagat
gcccgtggtgtggcaacatccctgagactcaacgaacggctcttcattgttaacccacag
gaaatgcacaaactgactccacacccagatcagcttgggcccaatgtaggttcagctgag
atgttagacttactgagtgccaaggatctggccaaccagctgactgaccatgactggaac
ctctttaagagcatccaccagcaactccgaaatgccaccactgccaacctggagcgcttc
atgcggcgtttcaatgaactgcaatactgggtagccacagagctgtgcttatgtcctgta
cctggtcttcggactcagttgctccgcaagttcatcaagctggcttctcacctcaaagaa
cagaagaacctcaactctttctttgccatcatgtttggtctcagcaattctgccatcagc
cgtcttgcccttacctgggagcggctgccccacaaagttcggaaactatattctgcactt
gaacagctactggacccatcttggaatcatcgtgtgtatcgattggcacttaccaagctg
tccccacccatcatcccctttatgcccctcctcctcaaagacatgaccttcatccatgag
ggaaaccatacactggttgacagtctcatcaactttgagaagatgcgtatgatggccaga
actgtacgaatattgcaccactgtcgaagtcatagctctgcgcctctgtcacccctccga
aaccgagtctcccacatacatgaggatagccaggctgtgaagatttatacttgttcagag
caatccttgagtgcccgaaatctggccagtgctcgggcatatatccagcagctgaaggtc
attgacaaccagcaagaactttctcggctctccaaagaactagagccttga
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