Sarcophilus harrisii (Tasmanian devil): 100929833
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Entry
100929833 CDS
T02286
Symbol
SOX13
Name
(RefSeq) transcription factor SOX-13 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shr03000
]
100929833 (SOX13)
Transcription factors [BR:
shr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100929833 (SOX13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
100929833
NCBI-ProteinID:
XP_003767655
Ensembl:
ENSSHAG00000007118
UniProt:
G3VYF8
LinkDB
All DBs
Position
4:97649275..97724626
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AA seq
617 aa
AA seq
DB search
MSMRSPISPQLALDGIGTMVNCTVKAEEKKDICQEAPSGQQVPAPAAEPLTGDPARPPQD
GADSSGPPQDCGSPRSDGPPEPRRSGPELATGSQEKLDFNRNLKEVMPTIEKLLSSDWRE
RLLGRSTVETKDVKGTQESLAEKELQLLVMIHQLSTLRDQLLTAHSEQKNMAAMLFEKQQ
QQMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFPPSHQPMPVTPDS
QLALPIQPIPCKPVEYPLQLLHSPSTPAVKRPGAVSTHHPLQESSQPLNLTAKPKGPELP
NTSSSPNLKISSCGPLPANHGAPTRDLQASPPSLPLGFLGEGDAITKAIQDARQLLHGHS
APMESSPNASFRKDLINLESSPAKDRLEESCGHQLDETILSCDMDGSRHFPESRNNNHIK
RPMNAFMVWAKDERRKILQACPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQHL
EKYPDYKYKPRPKRTCIVEGKRLRVGEYKALMRNRRQDARQNYVIPPPGNQMQMSSPDVL
YPRAPGMPLAQPLLEHYVPRSLDPSMPIIVNTRSLKEENEGAEDGHSVADGEMFRYSEEE
DSEVEEKSDGELVVLTD
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaggagccccatctctccccagctggcactcgatggcattgggaccatggtg
aactgtactgtcaaggcagaagaaaagaaggatatatgccaggaggctccatctggccag
caggtgccagcccctgctgcagagcctttgaccggagacccagcccggcccccccaggat
ggagctgactcaagtggcccaccccaggattgcgggtccccaagaagtgatgggccccca
gaacctaggagatctgggcctgagctagccactgggagccaagaaaagctggattttaat
cggaacttgaaagaagttatgccaaccattgagaagcttctgtccagtgactggagagag
aggcttctgggaagaagcactgtggaaaccaaagatgtcaaagggacccaagaaagcctg
gcggaaaaggaacttcagctcttggtcatgattcaccagctgtccactcttcgggaccag
cttctgacagctcactcagagcagaagaatatggctgccatgttgtttgagaagcagcag
caacagatggagctagccaggcagcagcaagagcaaatagcaaaacagcaacagcaactc
attcagcaacagcacaagatcaacctcctccagcagcaaatccagcaggtcaacatgcct
tatgtcatgatccctgcgttccctcccagccaccagcccatgcctgtcacccctgactcc
cagctggcattacctattcagcccatcccttgtaaaccagtggagtacccgctgcagctg
ctgcacagtccctctacccctgctgtgaagaggcctggggccgtctctacccatcaccct
ctccaggagtcttcacagcctctgaatttgacagccaagcccaaaggtccggagctgccc
aacacttccagctcccccaacctgaagataagctcctgtggtcccctccccgccaaccac
ggggctcccactcgggatctccaggccagcccacctagcctacccctaggctttctgggt
gagggtgatgctatcaccaaagctatccaggatgcccggcagctgctgcatggccacagt
gcgcccatggaaagctctcctaatgcatctttcaggaaggacctcatcaacctggagtca
tccccagccaaggatcggctggaggagagctgtgggcaccagctggatgagaccatactg
agctgtgacatggatggttcccgacactttcctgagtcccggaacaacaatcacattaag
aggcctatgaatgccttcatggtgtgggccaaggatgaacgacgaaagatccttcaggcc
tgtcctgacatgcataattccagtatcagcaaaattcttggctcccgttggaagtccatg
accaaccaggagaagcagccatactatgaggaacaggcacgactgagtcgccagcacctg
gagaagtatcccgattataaatataagcctcgacccaagcgcacatgcattgtggagggc
aagcgacttcgagtcggggagtacaaagctctgatgaggaaccggcgccaggacgcgagg
cagaattacgtgatccccccaccaggcaatcagatgcagatgagctccccggatgtcctg
tatcccagggcccctggaatgccactggcacagccccttctggagcactatgtgccccga
agcctggaccccagcatgccgattattgtcaacacccgaagccttaaggaagaaaacgag
ggagctgaggacgggcactctgtggccgacggggagatgttccggtacagtgaggaagaa
gactccgaagtcgaggagaaaagcgatggagagttggtggtgcttacagactga
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