Sarcophilus harrisii (Tasmanian devil): 100931887
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Entry
100931887 CDS
T02286
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04066
HIF-1 signaling pathway
shr04137
Mitophagy - animal
shr04140
Autophagy - animal
shr04148
Efferocytosis
shr04659
Th17 cell differentiation
shr04919
Thyroid hormone signaling pathway
shr05167
Kaposi sarcoma-associated herpesvirus infection
shr05200
Pathways in cancer
shr05205
Proteoglycans in cancer
shr05208
Chemical carcinogenesis - reactive oxygen species
shr05211
Renal cell carcinoma
shr05230
Central carbon metabolism in cancer
shr05231
Choline metabolism in cancer
shr05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04066 HIF-1 signaling pathway
100931887 (HIF1A)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100931887 (HIF1A)
04137 Mitophagy - animal
100931887 (HIF1A)
04148 Efferocytosis
100931887 (HIF1A)
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
100931887 (HIF1A)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
100931887 (HIF1A)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100931887 (HIF1A)
05205 Proteoglycans in cancer
100931887 (HIF1A)
05208 Chemical carcinogenesis - reactive oxygen species
100931887 (HIF1A)
05230 Central carbon metabolism in cancer
100931887 (HIF1A)
05231 Choline metabolism in cancer
100931887 (HIF1A)
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
100931887 (HIF1A)
09162 Cancer: specific types
05211 Renal cell carcinoma
100931887 (HIF1A)
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
100931887 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shr03000
]
100931887 (HIF1A)
Transcription factors [BR:
shr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
100931887 (HIF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
100931887
NCBI-ProteinID:
XP_003756377
Ensembl:
ENSSHAG00000012129
UniProt:
G3WFI3
LinkDB
All DBs
Position
2:318902341..318947439
Genome browser
AA seq
811 aa
AA seq
DB search
MEGGEGANDKKKISSERRKEKSRDAARCRRSKESEVFYELAHQLPLPHNVSSHLDKASVM
RLTISYLRMRKLLDAGDLEAEAEMEAQLNCFYLKALDGFVMVLTEDGDMIYMSENVNKCM
GLTQFELTGHSVFDFTHPCDHEELREMLIHRNGPVKKGKEQNTERSFFLRMKCTLTSRGR
TMNIKSATWKVLHCTGHIRVYDTCNNQSQCGYKKPPMTCLVLICEPIPHPSNIEVPLDSK
TFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQV
TTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVSGIVQHDLIFSLGQTECM
LKPVETVDMKITRLLTKVETEACSLFDQLKKEPDALTLLAPAAGDTIISLDFDNNEADEQ
QLEVPLYNDVMLPSSSEKLQNINLAMSPLPTTETTKPLRSNADPALNQEVALKLEPNPEP
LELSFTMPQIQDRPASPSDASTRQSSPEPSSSSEYCFDVDNDMANEFKLELVEKLFAEDT
EAKNPFSTQDTDLDLEMLAPYIPMDDDFQLRSFDQLSPLENTSTSSQSVSTLNIFQQSQT
QPTTSDEVKTVKTEGTDDNKILIGSPYSVYVINETASAPASNDENQNRTVSPDRAEKEVI
EQMEKSHPRSPNLLSVALSQRTTAIDEELNPKILALQNSQRKRKMEHEGSLFQAVGIGSL
HHCQDPDDPGTTISLSWKRVKGCKPSEQNGVEQKTVILIPSDLVSRLLGPSLDDSGLPQL
TSYDCEVNVPIQGNRNLLQGEELQRALDQLN
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggagggcggcgagggtgcgaacgacaagaaaaagattagctctgaacgccgaaaggaa
aagtctcgagatgcagccagatgtcgtagaagtaaggaatctgaagttttctatgaactt
gcccaccagttgccacttcctcataatgtgagctcacatcttgataaggcttctgtcatg
agacttaccatcagttatttgagaatgagaaaacttctagatgctggtgatctggaagct
gaagctgaaatggaagcacaattaaactgcttttatttgaaagccctagatggttttgtt
atggttctcacagaagatggtgacatgatttatatgtctgaaaatgtgaacaaatgtatg
ggattaactcagtttgaactaactggacacagtgtatttgattttacacatccatgtgac
catgaggaactaagagaaatgcttatacatagaaatggtcctgtgaaaaaaggcaaagaa
caaaacacagaacgcagctttttcctaagaatgaagtgtaccctaactagtcggggacga
accatgaacataaagtctgctacatggaaggtacttcattgtactggtcacattcgtgtg
tatgatacctgcaataaccagtctcagtgtggttataagaaaccacctatgacctgtttg
gtattgatttgtgaacccattcctcatccatcaaatattgaagttcctttggatagcaaa
acatttctcagccgccacagcctggatatgaagttttcatattgtgatgaaagaattaca
gagctaatgggatatgaaccagaggaacttttaggtcgctcaatttatgaatattaccat
gctttagactcagatcatctaaccaaaactcatcatgatatgtttactaaaggacaagtc
actacaggacaatatagaatgcttgccaaacgaggtggatacgtctgggttgaaactcaa
gcaactgtgatttacaacactaaaaattcccaaccacagtgtatagtgtgtgtaaattat
gttgtgagtggtattgttcagcacgacttgattttttcccttggacaaacagaatgtatg
ctaaaaccagtggaaacagttgatatgaaaataactcgattattgaccaaggttgaaaca
gaagcatgcagcctttttgatcaacttaagaaggaaccagatgctttaactttattagcc
ccagctgctggagatactatcatatctttggactttgacaataatgaagctgatgagcaa
caacttgaagttccattatacaatgatgtcatgcttccctcatctagtgagaaattacag
aatataaatttggcaatgtccccactacccaccactgaaactacaaaacccctccgtagc
aatgctgaccctgccctcaatcaagaagttgcactgaaattagaaccaaatccagagcca
ttggaactttcttttaccatgcctcaaatacaagatcgtccagctagtccttctgatgca
agcacaagacaaagttcacccgagcctagcagttccagtgaatattgttttgatgtggat
aatgatatggctaacgaattcaagttggaattagtggagaaactttttgcagaagacaca
gaagcaaagaatcctttttctactcaggacactgatttagacttggaaatgttagctcct
tatatcccaatggatgatgactttcagttgcgttcctttgatcaactttcaccattagag
aatacttctacaagttctcagagtgtgagcacccttaacatttttcagcagtctcaaaca
caacccactaccagcgatgaagttaaaacggtgaaaacagaaggtacagatgacaataaa
atattgattggttctccatattctgtttacgtaattaatgaaactgccagtgccccagca
tcaaatgatgagaatcaaaatcggacagtctctcctgacagagcagaaaaagaagtaata
gaacaaatggagaaatctcatccaagaagtcctaatctgctatctgtcgctttgagtcaa
agaactactgctatagatgaggagcttaatccaaagatattagctttgcagaattctcag
agaaaaaggaaaatggaacatgaaggttcactttttcaagcagtaggaattggatcgtta
catcattgccaggatccagatgatcctggaactactatatctctttcttggaaacgtgta
aaaggatgcaaacctagtgaacagaatggagtagagcaaaagacagtcatcttaataccc
tctgatttagtaagcagactcttgggcccatcattggatgacagtggactaccacaactc
accagttatgattgtgaagttaatgttcctatacaaggaaatagaaacctactgcaaggg
gaagaattacagagagctttggatcaacttaactga
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