KEGG   Sarcophilus harrisii (Tasmanian devil): 100932014
Entry
100932014         CDS       T02286                                 

Gene name
RXRG
Definition
(RefSeq) retinoic acid receptor RXR-gamma isoform X1
  KO
K08526  retinoid X receptor gamma
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03320  PPAR signaling pathway
shr04659  Th17 cell differentiation
shr04919  Thyroid hormone signaling pathway
shr04920  Adipocytokine signaling pathway
shr04928  Parathyroid hormone synthesis, secretion and action
shr05200  Pathways in cancer
shr05202  Transcriptional misregulation in cancer
shr05216  Thyroid cancer
shr05222  Small cell lung cancer
shr05223  Non-small cell lung cancer
shr05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:shr00001]
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    100932014 (RXRG)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    100932014 (RXRG)
   03320 PPAR signaling pathway
    100932014 (RXRG)
   04919 Thyroid hormone signaling pathway
    100932014 (RXRG)
   04928 Parathyroid hormone synthesis, secretion and action
    100932014 (RXRG)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100932014 (RXRG)
   05202 Transcriptional misregulation in cancer
    100932014 (RXRG)
  09162 Cancer: specific types
   05226 Gastric cancer
    100932014 (RXRG)
   05216 Thyroid cancer
    100932014 (RXRG)
   05222 Small cell lung cancer
    100932014 (RXRG)
   05223 Non-small cell lung cancer
    100932014 (RXRG)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:shr03000]
    100932014 (RXRG)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:shr03310]
    100932014 (RXRG)
Transcription factors [BR:shr03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    100932014 (RXRG)
Nuclear receptors [BR:shr03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   100932014 (RXRG)
SSDB
Motif
Pfam: Nuc_recep-AF1 Hormone_recep zf-C4
Other DBs
NCBI-GeneID: 100932014
NCBI-ProteinID: XP_012403075
Ensembl: ENSSHAG00000015367
LinkDB
Position
4
AA seq 467 aa
MYGNYSHFMKFPAGFGSSLSHTNSTSMSPSPALATGKSPDSHSNYIEAPVSVPRTLASPL
NAIASPLNALGSSYRVITSAIGPHSLSLATSPGVNMVGPPSSQLNVMNNVRSSDDVKPLP
GIQGMGTMSYPSTSPGSLAKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCR
DNKDCLIDKRQRNRCQYCRYQKCLVMGMKREAVQEERQRSRERSENEVESTSSGHEDMPV
ERILEAELAVEPKTESYGNTNMENSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLE
DQVILLRAGWNELLIASFSHRSVTVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVS
KMKDMQMDKSELGCLRAIVLFNPDAKGLSNPSEVEALREKVYATLEAYTKQKYPDQPGRF
AKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLETPLQIT
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgtatggaaattactctcacttcatgaagtttcctgcaggctttggcagttctctcagt
cacactaactccacatctatgagcccatcaccagccctggccacaggaaaatcaccggac
agtcactccaactacattgaggccccagtcagtgttccaaggacacttgcctccccactg
aatgccatcgcgtctcctctgaatgctctgggctcttcatacagggtcattacatcagcc
ataggacctcattcattatccctggctacctctccaggtgtcaacatggttggtccacct
agctctcagctcaatgtcatgaacaatgtcagaagctcagatgatgtcaagcctttgcca
gggattcaaggaatgggaaccatgagctatccatccactagtccaggctcccttgccaaa
catatctgtgccatctgtggagacagatcctcaggaaagcactatggggtatacagttgt
gaaggttgtaaaggattcttcaagaggaccataaggaaagacctcatctatacatgccgg
gataacaaggactgcctcattgataagcgccaacgtaaccgctgccaatattgccgctat
cagaagtgccttgtcatgggtatgaagagggaagctgtgcaagaagagaggcagagaagt
cgggagaggtctgagaatgaagtggagtccaccagcagtggccatgaagacatgcccgtg
gagaggatcctagaagccgagctcgctgttgaaccaaagactgaatcctatggtaacaca
aacatggagaattcaacaaatgatcccgtcaccaatatatgccatgctgctgataagcag
ctctttactcttgttgaatgggccaaacgcatcccccacttctctgacctcactttggaa
gaccaagttattcttcttcgagcaggctggaatgaattgctgattgcctccttctcccat
cgctccgtgactgtacaggatggaatcctcctggccactggtttacatgttcaccgaagc
agtgcccatagtgccggtgtggggtccatctttgacagagttctcactgagctggtttct
aaaatgaaagacatgcagatggataaatccgagttaggctgcctgcgggccattgtcctg
tttaacccagatgctaagggtttgtccaacccctctgaagtggaagctctccgagagaag
gtttatgctacccttgaagcatacaccaagcaaaaataccctgatcagcctggcaggttt
gccaagctcctgcttcgactcccggccctcaggtccatcggcttgaaatgtcttgagcac
ctctttttcttcaagctcattggagacacacccattgatacttttctcatggagatgctg
gaaacccctctccagattacctga

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