Sarcophilus harrisii (Tasmanian devil): 100933122
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Entry
100933122 CDS
T02286
Symbol
TOP3B
Name
(RefSeq) DNA topoisomerase 3-beta-1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03440
Homologous recombination
shr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100933122 (TOP3B)
03460 Fanconi anemia pathway
100933122 (TOP3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shr03032
]
100933122 (TOP3B)
03400 DNA repair and recombination proteins [BR:
shr03400
]
100933122 (TOP3B)
Enzymes [BR:
shr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
100933122 (TOP3B)
DNA replication proteins [BR:
shr03032
]
Eukaryotic type
DNA Topoisomerases
100933122 (TOP3B)
DNA repair and recombination proteins [BR:
shr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
100933122 (TOP3B)
FA (Fanconi anemia) pathway
100933122 (TOP3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
QueG_DUF1730
Motif
Other DBs
NCBI-GeneID:
100933122
NCBI-ProteinID:
XP_031804899
Ensembl:
ENSSHAG00000008866
LinkDB
All DBs
Position
1:712767296..712786248
Genome browser
AA seq
862 aa
AA seq
DB search
MKTVLMVAEKPSLAQAIAKILSRGNMSSRKGLNGACSVHEYTGSFSGQTVRFKMTSVCGH
VMTLDFTGKYNHWDRVDPAELFSKAPTEKKEANPKLSMVKFLQVEGRSCDYIVLWLDCDK
EGENICFEVLDAVLPVMNKPRGTEKTVFRARFSSITDTDICNAMGRLGEPDHNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPELY
WVLQAKINPDKESSVLLDWDRVRVFDREIAQMFLNITRTEKEAKVEGTSRKEKAKQRPLA
LNTVEMLRVASSSLGMGPQHAMQIAERLYTQGYISYPRTETTHYPENFDLKGSLKQQANH
PYWAQTVKQLLADGINRPRKGHDAGDHPPITPMRSATEAELGGDAWRLYEYITRHFIATV
SYDCKYLQNTISFQIGPERFTCSGKTLISPGFTEIMPWQSIPPEESLPTCQKGDTFALSE
VKMLEKQTSPPDYLTEAELITLMERHGIGTDASIPVHINNICQRNYVTVESGRRLRPTNL
GIVLVHGYYKIDAELVLPTIRSAVEKQLSLIALGKADYHQVLEHTLNIFKRKFHYFVDSI
AGMDELMEVSFSPLAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDETYTLPQNGTIKL
YKELRCPLDDFELVLWSSGSRGKSYPLCPYCYNHPPFRDMKKGMGCNECTHPSCQHSLSL
LGIGQCVECESGVLVLDPTSGPKWKMACNKCSVVVHFFENAHRVRVSADTCEACEAALVD
VDFNKAKSPLPGDETQHTGCVFCDPVFQELVELKHAAPCHPMHRSGPGKRQGRGRARGRR
PAGRLNPRRPKDKMAALAAYFV
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaagacggtgctgatggtggccgagaagccgtccctggctcaggccatcgccaagatc
ctgtccagagggaacatgtcctcgcgcaaaggtctcaatggcgcctgctccgtccacgaa
tacactggctccttcagcgggcagaccgtccgcttcaagatgacgtccgtctgtggccac
gtcatgaccttggatttcactgggaagtataaccactgggaccgcgtggacccggcagag
ctcttcagcaaagcccccacggaaaagaaggaggccaacccgaagctgagcatggtgaag
ttcctccaggtggaagggagaagctgtgactacatcgtgctctggctggactgtgataaa
gaaggggagaatatctgctttgaggtgctcgatgccgtcctgcccgtcatgaacaagcct
cggggcaccgagaagacggtgttcagagcgcgcttcagctccatcacagacacggacatc
tgtaacgccatgggccgcctgggcgagcccgaccacaacgaggccctctccgtggacgcg
cggcaggagcttgacctgcggattggctgcgccttcaccagattccagaccaagtacttc
cagggcaagtacggcaacctggacagctcgctcatctccttcgggccctgtcagaccccc
acgctgggcttctgcgtggaaagacacgacaagatccagtcattcaagccagagctgtac
tgggtgctccaggccaagatcaaccccgacaaggagagttcggtccttttggactgggac
cgcgttagagtgtttgaccgggagattgcgcagatgttcctcaatattaccaggacggag
aaggaagccaaggtggaagggacgagccgcaaggagaaggccaagcagaggccgctggcc
ttgaacacagtggagatgctgcgcgtggccagctcctctctgggaatggggccccagcac
gccatgcagatagcagagaggctctacacccagggctacatcagctaccctcggacggag
accacccactacccagaaaacttcgacctcaaggggtccctgaagcagcaagccaaccac
ccctactgggcccagacggtgaagcagctgttggcagacgggatcaaccggccacggaag
ggccacgacgcgggggaccaccctcccatcactcccatgaggtctgccaccgaggcagag
ctagggggcgacgcctggaggctctatgagtacatcacgcgccacttcattgccaccgtc
agctacgattgcaagtacctccagaacaccatctcgttccagatcgggccggagcgcttc
acctgctcgggaaagaccctcatctccccagggttcacggagatcatgccctggcagagc
atcccccccgaagagagcctgcccacctgccagaagggggacacctttgccctcagcgag
gtgaagatgctggagaagcagacgagccctcccgactacctgaccgaggccgagctcatc
acgctcatggagaggcacgggattggcacggacgccagcatccccgtgcacatcaacaac
atctgccagcggaattacgtcaccgtggagagcgggcgcagactgaggcccaccaacctg
ggcattgtcctggtccacggctactacaaaatagatgccgagctggtgctcccgacgatc
cgcagcgccgtggagaagcagctcagcctgatcgccctgggcaaggccgactaccaccag
gtgctggagcacacgctgaacatcttcaagaggaagttccactacttcgtggactccatt
gctggcatggacgaattgatggaagtgtccttctcgcccctcgctgccactggcaaaccg
ctctcccggtgtgggaagtgccatcgtttcatgaagtatatccaggccaagcccagccgc
ctgcactgttcccactgtgatgagacctacaccctgccccagaacggcaccatcaagctc
tacaaggagctgcgctgcccgctggatgacttcgagcttgtcctctggtcctcgggctct
cggggcaagagctaccccctgtgcccgtactgctacaaccacccgcccttcagggacatg
aagaaagggatgggctgcaacgagtgcacgcacccctcctgccagcactcgctcagcctg
ctgggcatcggccaatgcgtggagtgtgagagcggggtgctggtgctggaccccacctcg
ggccccaagtggaagatggcctgcaacaagtgcagcgtggtggtccacttctttgagaac
gcgcaccgggtccgagtctcggcggacacctgcgaggcgtgcgaggccgccctggtggac
gtggacttcaacaaagccaagtccccgctgccgggcgacgagacgcagcacacgggctgc
gtcttctgcgaccccgtgttccaggagctggtggagctgaagcacgcggccccctgccac
cccatgcaccgcagcggcccgggaaagaggcaggggcgaggacgggccaggggccgccgg
cctgcggggagactcaacccccggcggcccaaggacaagatggcggccctggcggcctac
tttgtatga
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