Stereum hirsutum: STEHIDRAFT_54222
Help
Entry
STEHIDRAFT_54222 CDS
T03127
Name
(RefSeq) small nuclear ribonucleo protein SmF
KO
K11098
small nuclear ribonucleoprotein F
Organism
shs
Stereum hirsutum
Pathway
shs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
STEHIDRAFT_54222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shs03019
]
STEHIDRAFT_54222
03041 Spliceosome [BR:
shs03041
]
STEHIDRAFT_54222
03032 DNA replication proteins [BR:
shs03032
]
STEHIDRAFT_54222
Messenger RNA biogenesis [BR:
shs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
STEHIDRAFT_54222
Spliceosome [BR:
shs03041
]
Complex A
U1 snRNP components
Sm proteins
STEHIDRAFT_54222
U2 snRNP components
STEHIDRAFT_54222
Complex B
U1 snRNP components
STEHIDRAFT_54222
U4/U6.U5 tri-snRNP components
STEHIDRAFT_54222
Complex C
U2 snRNP components
STEHIDRAFT_54222
DNA replication proteins [BR:
shs03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
STEHIDRAFT_54222
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
18805361
NCBI-ProteinID:
XP_007302317
JGI:
Stehi1_54222
LinkDB
All DBs
Position
Unknown
AA seq
84 aa
AA seq
DB search
VNPVNPKPFMQELTGKPVFVKLKWGLEYKGFLVSTDGYMNLQLANTEEFQNGESTGTLGE
VFIRCNNVLYIISFLFTILHECSN
NT seq
255 nt
NT seq
+upstream
nt +downstream
nt
gtcaacccagtcaacccaaaacctttcatgcaggagctgacgggcaagccagtgttcgtc
aagctgaagtggggattagagtacaagggcttcttggtcagcacagatggctacatgaat
cttcagcttgcgaacactgaggagttccaaaacggggagtcgacgggtacactgggcgag
gtattcattcggtgtaataacgtgttatacattataagtttcctatttactatcttgcac
gagtgtagcaactaa
DBGET
integrated database retrieval system
