KEGG   Sphingobacterium sp. ML3W: KO02_03870
Entry
KO02_03870        CDS       T03258                                 
Name
(GenBank) signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
sht  Sphingobacterium sp. ML3W
Pathway
sht02024  Quorum sensing
sht03060  Protein export
sht03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sht00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    KO02_03870
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    KO02_03870
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    KO02_03870
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sht02044]
    KO02_03870
Enzymes [BR:sht01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     KO02_03870
Secretion system [BR:sht02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   KO02_03870
  Eukaryotic Sec-SRP protein
   KO02_03870
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin cobW APS_kinase CbiA AAA_24 nSTAND3 AAA_17 NACHT AAA_22 DO-GTPase1 ATPase AAA_33 MMR_HSR1 AAA_18 AAA_30 ABC_tran AAA_25 ResIII TsaE AAA_23 AAA_16 Thymidylate_kin ArsA_ATPase AAA_31 Seryl_tRNA_N
Other DBs
NCBI-ProteinID: AIM35917
UniProt: A0A088EWP8
LinkDB
Position
822140..823477
AA seq 445 aa
MFQNLQDKLDRAFKVLKGQGSITEINVAETMKEIRKALLDADVNYKTAKVFTDDVKQKAL
GENVLTSISPGQLLTKIMNDELTALMGGSVTELETSKNPTVILIAGLNGAGKTTFAGKLA
LHLKDKKGKKPLLVAGDVYRPAAIDQLEILAEQVGVPVYVDRNSTDPIAIARAGVEEAKR
NGHNVVIIDTAGRLAIDEPLMVEITAVKEATQPHEILFVVDSMTGQDAVNTAKTFNDRLD
FTGVVLTKLDGDTRGGAALSIKSVVNKPIKFIGTGEKMDALDVFYPDRMASRILGMGDVV
SLVERAQHQFDEKQAAELQKKIRKNKFDFNDFKSQIQQIKKMGNMKDLMGMIPGVGKAMK
DIEVDDNAFKPIEAIIDSMTPFERENPDAIDQKRRIRIAKGSGTDINEVNKLMKQFGDMR
KVMKQMSNPAMAAKLMKNMPKMPGR
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgtttcagaacttacaggataaattagatagagcctttaaggttttaaaaggccaaggt
agtattaccgagatcaacgttgcagaaacgatgaaagaaattcgtaaggcattattagat
gccgatgtgaattataaaactgcaaaagtatttacggatgatgttaaacaaaaagcccta
ggggaaaatgtactaacaagtatttctccaggtcaattgttgacaaaaatcatgaatgat
gagttgacagcgttgatgggtggttctgttacagaattagaaacttcaaaaaacccaact
gttatccttatcgctggattgaatggtgctggtaaaacgacatttgcaggaaagttagca
ttacatttaaaagataaaaaaggcaaaaaacctttattggtggcaggtgacgtttatcgt
ccagcagctattgaccaattggaaatattggccgaacaagtaggcgttcctgtatatgtg
gatcgtaattccacagatcctattgctattgcaagagcaggggtagaagaggcaaaaaga
aatgggcataatgtggtcattattgatactgcaggtcgcttagcaatcgatgaaccattg
atggtggagatcacggctgtaaaagaagctactcaaccacatgaaattctttttgttgtc
gattcaatgacaggtcaagatgcggtgaatacagcgaagacattcaacgatcgattggat
tttacgggtgttgtattgacaaaattagacggcgatacccgtggtggtgctgcattgtct
attaaatctgttgtcaataaaccaatcaaatttattggtactggcgagaagatggatgca
ttggatgtgttttatccagatcgtatggcctctcgtatcttgggtatgggtgacgttgtt
tctttggtagaacgtgcgcaacatcagtttgatgaaaaacaagcggctgaactacaaaag
aaaattcgtaaaaataaattcgacttcaacgattttaaatcgcagatccagcaaatcaaa
aaaatgggtaacatgaaagatttgatggggatgattcctggagttggtaaagcaatgaaa
gatattgaagttgatgataatgcttttaaaccaatcgaagcaattattgattcgatgact
ccttttgaaagagaaaatcctgatgcaatcgatcagaaacgtcgtatccgcatcgcaaaa
ggatcaggtactgatattaatgaagtaaataagctgatgaaacaatttggagatatgcgt
aaagtcatgaaacaaatgtcaaatccagcaatggcggctaagctaatgaaaaacatgcct
aaaatgccaggaagataa

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