Staphylococcus hyicus: SHYC_06615
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Entry
SHYC_06615 CDS
T03578
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
shu
Staphylococcus hyicus
Pathway
shu03030
DNA replication
shu03430
Mismatch repair
shu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SHYC_06615 (holA)
03430 Mismatch repair
SHYC_06615 (holA)
03440 Homologous recombination
SHYC_06615 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shu03032
]
SHYC_06615 (holA)
03400 DNA repair and recombination proteins [BR:
shu03400
]
SHYC_06615 (holA)
Enzymes [BR:
shu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SHYC_06615 (holA)
DNA replication proteins [BR:
shu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SHYC_06615 (holA)
DNA repair and recombination proteins [BR:
shu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SHYC_06615 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DUF1451
Phage_tail_T
LCIB_C_CA
Motif
Other DBs
NCBI-ProteinID:
AJC96064
LinkDB
All DBs
Position
1346897..1347874
Genome browser
AA seq
325 aa
AA seq
DB search
MSTPIYTVYGEIPELIDKEINQIIDSYLDGEPKDDFNYIKFNLYETNFNQIIEEAMTMPF
FSDKKVILVQNTFIFTGEKISKDHTIDAHAVIEFIEKYNGDSLVIFQVFASKLDERKKMV
KTLKKHAKIKKVEQMSEVEMKQWIQSYLNQNFKDIKQDALDQFLTLTGIHYQLINQELDK
LLLYIGDKTTINLEDVKTIVNRSLEQNVFLLTEYIQNGQKQKAVTLMRDLIQLKEEPIKL
LALITSNYRLYYQSLILNQKGYSEQQIAKTVGAHPYRVKLALRHARKYTLESLLEKMNIC
VETDYQLKSSYMDKVLILELFILKL
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgccaatctatactgtgtatggagaaattcctgaattaatcgacaaagaaata
aaccaaattattgatagttatttggacggcgaacctaaagacgactttaactatataaaa
ttcaacttatatgaaacgaattttaatcaaattattgaagaagcgatgacgatgcctttt
ttttctgataaaaaagtgatcctcgttcaaaatacatttatttttacaggagaaaaaata
tcaaaagaccatacaattgatgcgcatgctgttatcgaatttatagaaaaatataatggg
gattcactcgttatctttcaagttttcgcatcgaaacttgacgaacggaagaaaatggtt
aaaacgttaaagaaacatgcaaagataaaaaaagtagaacaaatgtctgaagttgaaatg
aagcaatggatccaatcgtacttaaatcaaaattttaaagacattaaacaagacgcatta
gaccagtttttaacattgacaggtatccactatcaattaatcaatcaagaacttgacaaa
ttattactttatattggtgataaaacaacaatcaatttggaagatgttaaaacgattgta
aatcgaagtttggaacaaaatgtatttctattaacagaatatatacaaaacggtcaaaag
caaaaggcagtcacgttaatgcgagatttaatccagttaaaagaggaaccgataaaatta
ctcgctttaataacaagtaattatcgactttattatcaaagcttgattttaaaccaaaaa
gggtattcagaacaacaaatagctaaaactgtaggtgcgcacccatatcgtgtaaaactc
gctttaagacatgcaagaaagtatacgttagagtctttacttgaaaaaatgaacatttgc
gtggaaacagattatcaacttaaatcatcatatatggataaagtattaatccttgaattg
tttatattaaaattataa
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