Stella humosa: STHU_41870
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Entry
STHU_41870 CDS
T06078
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
shum
Stella humosa
Pathway
shum02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shum00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
STHU_41870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shum02000
]
STHU_41870
Transporters [BR:
shum02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
STHU_41870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
TAT_ubiq
Motif
Other DBs
NCBI-ProteinID:
BBK33553
LinkDB
All DBs
Position
complement(4418013..4419569)
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AA seq
518 aa
AA seq
DB search
MTHFASAASAAVVALALVAGVAAPAAAQKVLNAAMGAADLGSLDPHRTASTQDKAIIGWM
FNGLVRFKPGSLNPADIEPDLAERWESSADKKTWKFFLRKGVKFHGAYGEVTAEDVVFSI
QRASNPQTSAFSSDFRAIESVAALDPYTVEVKFKENVPSVLGIFTNFQGGNIVSKKAVEA
LGEEFRSKAVGTGPFAYSEYQRNQAVTLVAHADYFRGKPKLDKVVYRYIPSDASRDLAYT
NGEVDLIYGRADQRWVERMKSQPKTVLQIFGPGELGHLHLNMTKKPLDDVRVRQAIAHAV
DRDQLVKFRGASVFRPAVSVVPEGYLGTDANAPLPKHDLAKAKALLAEAGHKDGITIKAV
QTSQPSMLTVMEVVQAQLKRAGINLVFDVVDHPTFHAQIRKDVSDLVYYSSARFPIADQH
LTQYFHSRSIVGTPTAVTNFSHCKVADAEIDAARIETDPAKQLELWKTAQLKVIEAACAV
ALVANTQVWAHRDNFDLGYELKGSLSLGPMLTENSTFK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatttcgcatccgccgcctccgcggcggtggtggccttggcattggtggcgggc
gtcgccgcgccggccgccgcccagaaggtgttgaacgcggcgatgggggcggccgacctc
ggctcgctcgatccgcaccgcacggcatcgacccaggacaaggcgatcatcggctggatg
ttcaacggtctcgtccgcttcaagccgggcagcctcaacccggccgacatcgagcccgat
ctggccgaacgttgggaaagctcggccgacaagaagacctggaagttcttcctccgcaag
ggcgtgaagttccacggcgcctatggcgaggtgacggccgaggatgtcgtcttctcgatc
cagcgcgcgtccaatccccagacctctgccttctcgtcggatttccgggcgatcgagtcc
gtggccgcgctcgatccctacacggtcgaggtgaagttcaaggagaacgtgccgagcgtg
ctcggcatcttcaccaacttccagggcggcaacatcgtcagcaagaaggccgtcgaggcg
ctgggcgaggagttccggtccaaggccgtcggcaccggtccgttcgcctattccgaatac
cagcgcaaccaggccgtcacgcttgtggcccacgccgactatttccgcggcaagccgaag
ctcgacaaggtcgtctaccgctacatcccgtccgatgccagccgcgacctggcctatacc
aacggcgaggtcgacctgatctacggccgggccgaccagcgctgggtcgagcgcatgaag
agccagccgaagacggtcctgcagatcttcgggccaggcgagttgggccatcttcatctc
aacatgaccaagaagccgctcgacgacgtgcgcgtccgccaggcgatcgcccatgccgtc
gaccgcgaccagctggtcaagttccggggcgccagcgtcttccgccccgccgtgtcggtg
gtgccggaaggttatctcggcaccgacgcgaacgcgccgctgccgaagcatgacttggcc
aaggccaaggccctgctggccgaggccggccacaaggacggcatcacgatcaaggcggtc
cagacctcgcagcccagcatgctgacggtgatggaagtcgtgcaggcgcagctgaagcga
gccggcatcaacctcgtcttcgacgtggtcgaccatccgaccttccacgcccagatccgc
aaggacgtgagcgatctggtctactactcgtcggcgcgcttcccgatcgccgaccagcac
ctgacgcagtatttccattcgcgcagcatcgtcggcacgccgacggccgtgacgaacttc
tcgcactgcaaggtggccgatgccgagatcgatgcagcgcgcatcgagacggacccggcc
aagcagctggagctgtggaagaccgcccagctgaaggtgatcgaggcggcctgcgccgtg
gcgctggtggccaacacgcaggtctgggcgcatcgcgacaatttcgacctcggctacgag
ctgaagggctcactcagcctggggccgatgctgaccgagaactcgaccttcaagtga
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integrated database retrieval system
