Stella humosa: STHU_52820
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Entry
STHU_52820 CDS
T06078
Symbol
miaB
Name
(GenBank) tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
shum
Stella humosa
Brite
KEGG Orthology (KO) [BR:
shum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shum03016
]
STHU_52820 (miaB)
Enzymes [BR:
shum01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
STHU_52820 (miaB)
Transfer RNA biogenesis [BR:
shum03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
STHU_52820 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
BBK34648
LinkDB
All DBs
Position
complement(5551105..5552547)
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AA seq
480 aa
AA seq
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MRERGLTALTKKLHLKTYGCQMNVYDSARMADVLAPLGYALTDVADEADLVILNTCHIRE
KAGEKVYSELGRLRPLKVQRRAEGGDLLLAVAGCVAQAEGAEVVRRAPHVDIVVGPQSYH
QLPELIARATRAAAPGGPAPGRGIVATDFPVESKFDSLPQQSEPQDVSVFLAVQEGCDKF
CTFCVVPYTRGAEYSRPAADILAEARRLVTLGAREITLLGQNVNAWHGAGGSGGEWGLGR
LIRALAEVDGLRRIRYTTSHPRDMDDDLIAAHADVPQLMPFLHLPVQSGSDRLLARMNRR
HTADDYRRIVDRLRATRPDIALSSDFIVGYPGESDADFAQTMDLIAATGFAQAFSFKYSP
RPGTPAASEPVQVDEAVKAGRLAALQDLLRTQQDAFNRATVGRRVPVLFEKRGRHPGQLV
GRTPWLQSVHVDGAERLIGCELAVDIEAAGTNSLAGRIVTGETTGLGAVAMGAAGMGAAA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgaacggggccttacggcattgaccaagaaactccatctcaaaacctacggctgc
cagatgaacgtctacgactccgcccgcatggcggatgtcctggcgccgctcggctatgcc
ctgacggatgtggcggacgaggccgacctcgtcattctcaacacctgccatatccgcgag
aaggccggcgagaaggtctattccgagctgggtcgcctgcgcccgctcaaggtccagcgc
cgcgccgaaggcggcgacctgctgctggcggtggccggctgcgtcgctcaggccgaaggg
gcggaggtcgtgcgccgcgcaccccatgtcgacatcgtcgtcggcccgcaatcctaccac
cagctcccggaattgatcgcgcgggcgacgcgcgcggctgcccccggcggcccggcacct
ggccggggcatcgtcgccacggacttcccggtcgaatccaagttcgattcgctgccgcag
cagagcgagccgcaggacgtgtcggtattcctggcggtgcaggagggctgcgacaaattc
tgcaccttctgcgtcgtgccctacacccgcggtgcggaatactcgcgcccggcggccgac
atcctggccgaggcccggcgcctggtgacgctgggcgcgcgcgagatcaccctgctcggc
cagaacgtcaatgcctggcatggcgccggcggcagcggcggcgaatggggccttggtcgg
ctgatacgggccctggcagaggtcgatggccttcgccgcatccgctacacgacctcgcac
ccgcgcgacatggacgacgacctgatcgccgcccatgccgacgtgccgcagctcatgccg
ttcctgcacctgccggtgcagtcgggctccgaccggctgctggcgcggatgaaccgccgc
cacaccgccgacgactatcgccgcatcgtcgaccgcctgcgcgccacccggcccgacatc
gcgctctcttcggatttcatcgtcggctacccgggcgagagcgacgcggacttcgcccag
accatggacctgatcgccgcgacgggtttcgcccaggccttctcgttcaagtacagcccg
cggcccgggactcctgccgcgtccgagccggtccaggtcgacgaggccgtgaaggccggc
cggctggccgcgctgcaggatctgctgcggacccagcaggacgccttcaatcgcgccacg
gtcggccggcgggtgcccgtgctgttcgagaagcgtggccgccatccaggccagctcgtc
ggccggacgccctggctgcagtcggtgcatgtcgacggcgcggaacggctgatcggctgc
gagctggcggtcgacatcgaggccgccggcacgaacagcctggccggccgcatcgttacg
ggcgagaccactggcctgggtgcggttgccatgggcgcagcgggcatgggtgcggcggca
tga
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