Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_3215
Help
Entry
SHJG_3215 CDS
T02063
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shy03009
]
SHJG_3215
Enzymes [BR:
shy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
SHJG_3215
Ribosome biogenesis [BR:
shy03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SHJG_3215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
ThiS
S4_2
Motif
Other DBs
NCBI-ProteinID:
AEY88489
LinkDB
All DBs
Position
complement(3763314..3764375)
Genome browser
AA seq
353 aa
AA seq
DB search
MRSSGSGKSGGRGNYRGAGNDRDQKQGQGRPRKPRPEERRYDVGPGATKDGPKAGRGGAA
RGGTKGGPKRPQQGGRTAPSRSREYETRVEERNRERYAGKKDIKLPKTFPGAEQEGERLQ
KVLARAGYGSRRACEELIDQARVEVNGEIVTEQGKRVDPEKDEVKVDGLTVATQSYQFFS
LNKPAGVVSTMEDPEGRQCLGDYVTNRETRLFHVGRLDTETEGVILLTNHGELAHRLTHP
KYGVKKTYLAHIVGPIPRDLGKRLKDGIQLEDGYARADHFRVVEQTGKNYLVEVTLHEGR
KHIVRRMLAEAGFPVDKLVRTAFGPITLGDQKSGWLRRLSNTEVGMLMKEVDL
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagcagcggcagcggcaagagcggcgggcgcggtaactaccgcggtgccggcaac
gacagggaccagaagcaggggcagggccggccccgcaagccccgccccgaggagcgccgc
tacgacgtgggcccgggggccaccaaggacggccccaaggccgggcgcggcggcgcggcg
cgcggagggaccaagggcggcccgaagcggccccagcagggcggccgtacggccccgtcg
cgctcccgcgagtacgagacgcgggtcgaggagcgcaaccgggagcggtacgcgggcaag
aaggacatcaagctgcccaagaccttcccgggcgccgagcaggagggcgagcggctccag
aaggtcctcgcgcgcgcgggctacggctcccggcgggcctgcgaggagctgatcgaccag
gcccgggtcgaggtgaacggcgagatcgtcaccgagcagggcaagcgggtcgacccggag
aaggacgaggtcaaggtcgacggcctgacggtcgcgacccagtcgtaccagttcttctcg
ctgaacaagcccgcgggtgtggtctccaccatggaggacccggagggccggcagtgcctc
ggtgactacgtcaccaaccgcgagacccggctcttccacgtcggccggctggacaccgag
accgagggcgtcatcctgctcaccaaccacggcgagctggcccaccgcctcacgcacccc
aagtacggcgtgaagaagacctacctcgcgcacatcgtcggcccgatcccgcgcgacctg
ggcaagcggctgaaggacggcatccagctggaggacggctacgcgcgcgcggaccacttc
cgcgtggtcgagcagaccggcaagaactacctggtcgaggtgaccctgcacgagggccgc
aagcacatcgtgcgccgcatgctggccgaggcgggcttcccggtcgacaagctggtgcgc
accgccttcggcccgatcaccctgggcgaccagaagtcgggctggctgcgccgcctgtcc
aacaccgaggtcggcatgctgatgaaggaagtcgacctctaa
DBGET
integrated database retrieval system
