Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_4296
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Entry
SHJG_4296 CDS
T02063
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shy03019
]
SHJG_4296
03009 Ribosome biogenesis [BR:
shy03009
]
SHJG_4296
Messenger RNA biogenesis [BR:
shy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SHJG_4296
Ribosome biogenesis [BR:
shy03009
]
Eukaryotic type
Pre-60S particles
RNases
SHJG_4296
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AEY89568
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All DBs
Position
4948277..4948879
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AA seq
200 aa
AA seq
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MNDRMVWIDCEMTGLSLSDDALIEVAALVTDSELNVLGEGVDIVIRPPDRALETMPEVVR
RMHTASGLLAELESGTTLEDAEEQVLAYVREHVKEPGKAPLCGNSVGTDRGFLLRDMPTL
EDYLHYRIVDVSSIKELARRWYPRAYFNSPEKNGNHRALADIRESIAELRYYREAIFVPQ
PGPDSDTAKAIAAKHVLPAR
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcgcatggtgtggatcgactgcgagatgaccggcctctcgctgtccgacgac
gctctcatcgaggtggccgccctcgtcaccgactccgagctgaacgtactcggcgaggga
gtggacatcgtcatccgcccgccggaccgggcgctggagacgatgccggaggtggtgcgt
cggatgcacaccgcgtccgggctgctcgccgagctggagagcggcacgacccttgaggac
gccgaggagcaggtcctcgcctacgtccgggagcacgtgaaggagcccggcaaggccccg
ctgtgcggcaactcggtcggcaccgaccgcgggttcctcctgcgggacatgccgaccctg
gaggactacctccactaccgcatcgtcgacgtctcctcgatcaaggagctggcccgccgc
tggtatccgcgggcgtacttcaacagcccggagaagaacggcaaccaccgggccctcgcc
gacatccgcgagtcgatcgccgagctgcgctactaccgcgaggccatcttcgtgccgcag
cccgggccggactccgacaccgcgaaggcgatcgccgccaagcacgtcctgcccgcccgg
tag
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