Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_4674
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Entry
SHJG_4674 CDS
T02063
Name
(GenBank) RNA polymerase principal sigma factor hrdD
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UvrB
KORA
DUF6668
Hexokinase_2
Motif
Other DBs
NCBI-ProteinID:
AEY89945
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Position
complement(5382810..5383808)
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AA seq
332 aa
AA seq
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MATRAVARRKSATGETADSASSVRAHGGEIADRDLVGMYLDEIARTPLLDAAKEVELSQT
IEAGVFARQVLDGEEESKTDATREELEALVAAGERAKDVFIRSNLRLVVAVARRYPRSGL
PLLDLIQEGNAGLVRAVEKFDYRKGFKFSTYATWWIRQAITRSIADQSRTIRLPVHLVEE
LGRIRRVQREFNREHGREPEPAEIAAELGSTPERVTDVLDWSRDPVSLNMSVDDEGETQF
GDLLEDTSAVSPEQSVMTLLRSEELDDLIGRLDQRTASIIKMRYGIEDGRERTLTEVGKE
HGLTRERIRQIEKHALLELKKLARQTGFDAAA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcaacccgtgccgtcgcccgtcgtaagtccgccactggcgagacggccgactcggca
agcagtgttcgcgctcatggcggcgagatcgcagaccgcgacctggtcggcatgtacctc
gacgagatcgcgcgtacgccgctgctcgacgccgccaaggaggtcgagctgtcccagacc
atcgaggcgggtgtgttcgcgcggcaggtcctcgacggcgaggaggagtccaagacggac
gccacccgcgaggagctggaggccctggtcgccgccggtgagcgggccaaggacgtcttc
atccgctccaacctccgcctggtcgtcgcggtcgcccggcgctacccgcgcagcggtctg
ccgctgctcgacctgatccaggagggcaacgccggcctggtgcgcgccgtggagaagttc
gactaccgcaagggcttcaagttctcgacgtacgccacctggtggatccggcaggccatc
acccggtcgatcgccgaccagtcccgcacgatccggctccccgtccacctggtggaggag
ctgggccgcatccgccgcgtgcagcgcgagttcaaccgcgagcacggccgcgagccggag
ccggccgagatcgccgcggagctgggctcgacgccggagcgcgtcacggacgtcctcgac
tggtcccgcgacccggtctcgctgaacatgtcggtggacgacgagggtgagacccagttc
ggcgacctgctggaggacacctcggcggtctctcccgagcagtcggtcatgaccctgctg
cgcagcgaggagctggacgacctgatcggccgcctggaccagcgcacggcctccatcatc
aagatgcggtacggcatcgaggacggccgcgagcgcaccctgaccgaggtcggcaaggag
cacgggctcacccgtgagcggatccggcagatcgagaagcacgcgctgctggagctgaag
aagctggcccgccagaccggtttcgacgcggcggcgtga
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