Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_6940
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Entry
SHJG_6940 CDS
T02063
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shy03032
]
SHJG_6940
03400 DNA repair and recombination proteins [BR:
shy03400
]
SHJG_6940
Enzymes [BR:
shy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SHJG_6940
DNA replication proteins [BR:
shy03032
]
Prokaryotic type
DNA Topoisomerases
SHJG_6940
DNA repair and recombination proteins [BR:
shy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SHJG_6940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
FliT
ZT_dimer
Mei5
HALZ
Motif
Other DBs
NCBI-ProteinID:
AEY92207
LinkDB
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Position
complement(7906474..7908933)
Genome browser
AA seq
819 aa
AA seq
DB search
MARRSTKTPPPDDSFEERILDIDVVDEMRGSYLEYAYSVIYSRALPDARDGLKPVHRRIV
YQMNEMGLRPERGYVKCARVVGEVMGKLHPHGDASIYDALVRMAQPFSMRVPLVDGHGNF
GSLGNDDPPAAMRYTECRMAEATSLMTESIDEDTVDFAPNYDGQEQEPVALPAAFPNLLV
NGSSGIAVGMATNMPPHNLREVIAAARHLIRNPNADLDALMKHVPGPDLPTGGRIVGLDG
IRDAYATGRGTFKMRATVSVETVTARRKGLVVTELPFTVGPEKVIAKIKDLVNAKKVQGI
ADVKDLTDREHGLRLVIEIKNGFVPEAILEQLYKLTPMEESFGINNVALVDGQPLTLGLK
ELLEVYLDHRFDVVRRRSEFRRGKKRDRLHLVEGLLTALVDIDEVIRIIRSSENSAQAKE
RLIERFSLSEVQTQYILDTPLRRLTKYDRIELEAEKDKLTAEIEELTRILESDAELRKLV
SAELAAVAKKFGTDRRTVLLESAGAPAATVPLQVADDPCRVLLSSTGLLARTATDEPFPE
AAGAKRVKHDVIVSAVPATARGVIGAVTSEGRLLRINVVDLPQLPEQAGAPNLSGGAPLA
EFVSLEDDETVVCLTTLDESSPGLALGTEQGVVKRVVPDYPSNKDELEVITLKEGDRIVG
AVELRTGEEDLVFITDDAQLLRFQASIVRPQGRPAGGMAGIKLTEGAKVISFTAVDPAVD
AVVFTVAGSRGTLDDSVQTTAKLTPFDQYPRKGRATGGVRCQRFLKGEDCLSLAWAGPTP
ALAAQKNGTPADLPEPDPRRDGSGTSLAKTVAVVAGPVL
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgcagcacgaagaccccgccgcccgacgattcgttcgaggagaggatcctc
gacatcgacgtcgtggacgagatgcgtggctcctacctggagtacgcgtactcggtcatc
tactcgcgcgccctgccggacgcccgcgacggcctgaagccggtgcaccgccgcatcgtg
taccagatgaacgagatgggcctgcgccccgaacgcggctatgtgaagtgcgcccgtgtc
gtcggcgaggtcatgggcaagctgcacccgcacggcgacgcgtcgatctacgacgccctg
gtgcgcatggcgcagcccttctccatgcgcgtgccgctggtcgacggccacggcaacttc
ggctcgctgggcaacgacgacccgccggccgccatgcggtacaccgagtgccggatggcc
gaggcgacgagcctgatgaccgagtcgatcgacgaggacacggtcgacttcgcgccgaac
tacgacggccaggagcaggagccggtggcgctgcccgccgccttcccgaacctgctggtc
aacggctcctcgggcatcgcggtcggcatggcgacgaacatgccgccgcacaacctgcgc
gaggtcatcgccgccgcccgccacctgatccgcaacccgaacgcggacctggacgcgctg
atgaagcacgtccccggcccggacctgcccaccggcggccggatcgtcggcctggacggc
atccgggacgcgtacgcgaccggccgcggcaccttcaagatgcgcgcgaccgtctcggtc
gagacggtcaccgcccgccgcaagggcctggtggtcaccgagctgccgttcacggtcggc
cccgagaaggtcatcgcgaagatcaaggacctggtcaacgcgaagaaggtccagggcatc
gccgacgtcaaggacctcaccgaccgcgagcacggcctgcgcctggtcatcgagatcaag
aacggcttcgtgccggaggcgatcctggagcagctgtacaagctgaccccgatggaggag
tccttcggcatcaacaacgtcgccctggtcgacggccagccgctcaccctgggcctgaag
gagctgctggaggtctacctggaccaccgcttcgacgtggtccggcgccgcagcgagttc
cgccgcggcaagaagcgcgaccggctgcacctggtcgagggcctgttgaccgcgctggtc
gacatcgacgaggtcatccggatcatccggtccagcgagaactccgcgcaggccaaggag
cgcctgatcgagcgcttctcgctgagcgaggtgcagacgcagtacatcctcgacacgccg
ctgcgccggctcaccaagtacgaccggatcgagctggaggcggagaaggacaagctcacc
gcggagatcgaggagctgacccggatcctggagtcggacgcggagctgcgcaagctggtc
tcggccgaactggccgccgtggcgaagaagttcggcaccgaccggcgcacggtcctgctg
gagtccgcgggcgccccggcggccaccgtcccgctccaggtggccgacgacccgtgccgg
gtgctgctgtcctcgacggggctgctggcgcgtacggcgaccgacgagccgttcccggag
gcggcgggcgccaagcgcgtcaagcacgacgtgatcgtctcggcggtgccggcgaccgcg
cgcggggtgatcggcgcggtgacctcggaaggccggctgctgcggatcaacgtggtcgac
ctgccgcagctgcccgagcaggccggcgcgccgaacctctccggaggggccccgctggcg
gagttcgtctccctggaggacgacgagacggtggtctgcctgaccacgctggacgaatcg
tccccgggtctcgcgctcggcaccgagcagggcgtcgtcaagcgcgtggtgcccgactac
ccgtccaacaaggacgagttggaggtcatcacgctcaaggagggcgaccggatcgtcggc
gcggtggagctgcgcaccggcgaggaggacctggtgttcatcacggacgacgcgcagctg
ctgcgcttccaggcctccatcgtgcgcccgcagggccgcccggcgggcggcatggcgggc
atcaagctcaccgagggcgcgaaggtgatctccttcacggcggtcgacccggccgtcgac
gcggtggtgttcacggtcgcgggctcgcgcggcacgctggacgactcggtgcagacgacg
gccaagctcaccccgttcgaccagtacccgcgcaagggccgggcgacgggcggcgtgcgc
tgccagcggttcctgaagggcgaggactgcctgtcgctggcctgggcgggcccgacgccc
gcgctcgcggcgcagaagaacggcaccccggcggacctgccggagccggacccgcgccgg
gacggctcgggcacgtcgctggcgaagacggtggcggtggtggcggggccggtgctgtag
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