Shinella sp. HZN7: shn_00430
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Entry
shn_00430 CDS
T04278
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
shz
Shinella sp. HZN7
Pathway
shz00061
Fatty acid biosynthesis
shz00071
Fatty acid degradation
shz01100
Metabolic pathways
shz01212
Fatty acid metabolism
shz02024
Quorum sensing
Module
shz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
shn_00430
00071 Fatty acid degradation
shn_00430
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
shn_00430
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
shz01004
]
shn_00430
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shz04147
]
shn_00430
Enzymes [BR:
shz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
shn_00430
Lipid biosynthesis proteins [BR:
shz01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
shn_00430
Exosome [BR:
shz04147
]
Exosomal proteins
Exosomal proteins of breast milk
shn_00430
Exosomal proteins of breast cancer cells
shn_00430
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ANH02653
UniProt:
A0A1A9FX38
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All DBs
Position
complement(88367..90067)
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AA seq
566 aa
AA seq
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MTATIEAPSTQPSGRFWLASYPEGMAAQIAPLGHASIGALVESCCAHYADRPAFTSMGKT
LTFRDFEAASAKIAAWLQARGLEKGDRVAVMMPNILQNPVIIFGILRAGLVVVNVNPLYT
PRELEHQLKDAGAKALFVLENFASTVAQVVSRTAVRHVVVTTMGDMLGLKGLIVNLVVRR
VKKLVPAWSLPGHIPFTQVMAEGARGRIKPVSIAPDDTAFLQYTGGTTGVSKGATLTHAN
LLSNMEQIKLWIEPTFRIKQRPEQLVFVCALPLYHIFALTVNGLMGIALGGHNVLIANPR
DIPAFIKELTKVRIHIFPGLNTLFNALMNNPDFTKADLSGLVLTLGGGMAVQRPVAERWQ
AMTGCAITEGYGLSETSPVATANRFDRAEFTGTIGLPLPSTDIEIRDDDGKTLALGEVGE
ICIRGPQVMAGYWQRPDETAKVMTPDGFFRSGDIGFMTPEGFTKIVDRKKDMILVSGFNV
FPNEVEEVAMSLAGILECAAIGVPDEHSGEAVKLFVVKKDPALTEVDVKAHCAANLTNYK
RPKFIEFRTELPKSNVGKILRKDLRG
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccacgatcgaagccccttccacccagccctccggccggttctggctcgcctcc
tatcccgagggcatggcagcacagatcgcgccgctcggccacgcctccatcggcgcgctc
gtcgaaagctgctgcgcacactatgccgatcggccggccttcaccagcatgggcaagacg
ctgaccttccgggatttcgaggcggcctcggcaaagatcgccgcctggcttcaggcgcgg
gggctcgaaaagggtgaccgggtcgccgtgatgatgcccaacatcctgcagaacccggtc
atcatcttcggcatcctgcgcgccggcctcgtcgtggtgaacgtcaacccgctctatacg
ccgcgggagctggagcaccagttgaaggacgcgggcgccaaggcgctgttcgtgctggag
aattttgcgagcaccgtggcgcaggtcgtctcgcgcaccgcggtccggcatgtcgtcgtc
accacgatgggcgacatgctcgggctcaagggactgatcgtcaatctcgtcgtgcgccgg
gtgaagaagctggtgcccgcctggtcgctgccgggccatatcccctttacccaggtgatg
gcggagggcgcgcgcggccgcatcaagccggtcagcatcgcgcctgacgacaccgccttc
ctgcaatataccggcggcacgacgggcgtctccaagggcgcgacgctgacccatgccaac
ctgctctccaacatggagcagatcaagctgtggatcgagccgaccttccgcatcaagcag
cggccggagcagctcgtcttcgtctgcgctctgccgctctaccatatcttcgcgctgacg
gtgaacgggctgatgggcatcgcgctcggcggccacaacgtgctgatcgccaatccgcgc
gatatcccggccttcatcaaggagttgacgaaggtcaggatacacatcttccccggcctc
aacaccctgttcaacgcgctgatgaacaatccggatttcaccaaggcggatctttccgga
ctcgtgctgacgctcggcggcggcatggcggtgcagcggccggtcgccgagcgctggcag
gcgatgacgggctgcgcgatcaccgagggctacggcctgtccgaaacctcgccggtcgcg
accgccaaccgcttcgacagggcggaattcaccggcacgatcggcctgccgctcccctcg
accgacatcgagatccgcgacgacgacggcaagacgctggcgctcggcgaggtcggcgaa
atctgcattcgcggcccccaggtcatggccggctactggcagcggccggacgagacggcc
aaggtgatgacgccggacggcttcttccgctccggcgacatcggcttcatgacgccggag
ggttttaccaagatcgtcgaccgcaagaaggacatgatcctcgtctccggcttcaacgtc
ttccccaacgaggtggaggaggtggcgatgtcgcttgccggcatcctcgaatgcgctgcg
atcggcgtgccggacgagcattccggcgaggcggtgaagctcttcgtggtgaagaaggac
ccggcgctgacggaggtcgacgtgaaggcccattgcgcggcgaacctgaccaattacaag
cgaccgaaattcatcgaattccgcaccgaactgccgaaatccaatgtcggcaagatactg
cgcaaggatctccgcggctga
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