Shinella sp. HZN7: shn_22045
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Entry
shn_22045 CDS
T04278
Name
(GenBank) ATP-dependent endonuclease
Organism
shz
Shinella sp. HZN7
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
ANH06454
UniProt:
A0A1A9G6C3
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Position
4602694..4606086
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AA seq
1130 aa
AA seq
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MSSVSKVLKDDGARRDAISLHDRSILVEAGAGSGKTAVMAGRIAAMLAEGVAPRSIAAVT
FTELAASELLSRVREFVADLSAGTIATELRVALPDGLSQAHRDNLAAASAAIDEITCSTI
HGFCQRLIKPYPAEADIDPGAGVMDRNQADLTFLEIVDSWLRERLSGGQDGILAEMVLHS
PSETVALIHKIAENLRRRPTLAAPPVSPLDGHLTAFRQAAADFAGFMDGAAAAEPETVTI
VERLAEMATAVANGPDPATPAGLVRLLTARPHPDLCTKAGAFASYRKKGKWAAAAKEAGL
SKADGERLNDAAETHYTACCDAWVALVQAAASHALAAVIDEARPILQHYRDHKRASAQLD
FDDLIFAARDLLRDHDAVRRALGQRFAHVLVDEFQDTDPLQTEIFWRLCGEPADGDDDWT
RFQIRPGALFLVGDPKQAIYRFRGADVGAYVQARDAFRAQDPGSLLSISTNFRSCASILT
FVNERFEAVLSADGQPGFTALDPFHDDRGGLCVAALDIAVADENGKASAEQQRDAEADAI
AELCARLIESHPIIDRRSGAERLCQPGDIALLAPTGAELWRYEEALERRGIPVATQAGKG
LFRRQEIQDLIALTRVLADRRDTLALGALLRGPLVGLTEENLLDIIWALPRSEEQPDRIP
RLDLSIDPALITHPLAREVIERLQSLSRRGNSTTPHELLSQAVDVMRVRPLLLERHRGQA
ERALANVDLYLSLSTSYAVRGLRAFAEAMTTAWSDEARAVEGRPDAQEEAVALFTMHAAK
GLEWPIVIPVNTMTGVMAPENAVIDRQTETFFCPVLGVPPEGYETAREAEKDELDRERIR
LWYVAATRARELLVLPRLDTTPSKSAWIGLVDLSLAELPGLDISHLPDSITAAGAGAANA
QTRASFAAEAEAIAATQTRLTWLAPSRDESAAGTVLREEEPALWTGSADDQPPELEDTAL
VQGGRERGLILHKLMEEVLTGETPEAKAALTERAAELIRALGRSPVADPATGLSAQELAD
CVTRTLALPDIAALRPGLLAEFPVYAAQAAEGVETATAGIADALTVGGDGRPVVVVDWKS
DVNPDAQTLDHYRAQVRAYLDMTGAERGLIVLMTRGTVVVVSPSPQTVAA
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgtgtccaaggtgctgaaagacgacggcgcccgccgcgatgcgatcagcctt
catgatcgctccatcctggtcgaggctggcgcgggttcgggcaagactgccgtcatggca
gggcgtattgccgccatgctcgccgaaggcgtcgcgccgcgttccatcgccgccgtcacc
ttcaccgaactcgccgcgagcgagctgctgtcgcgtgtccgcgagttcgtcgccgacctc
tcggccggcacgatcgcgaccgagctgcgcgtggcgctgcccgatgggctgagccaggcc
catcgcgacaatctcgccgccgccagcgccgcgatcgacgagatcacctgttcgaccatc
cacggcttctgccagcgcctgatcaaaccctatccggcggaggccgacatcgatcccggc
gccggcgtcatggatcgcaaccaggccgatctcaccttcctcgaaattgtcgatagctgg
ctgcgcgaacgcctgtccggtggccaggacggcatcctggccgagatggtgctgcacagc
cccagcgaaaccgtggcgctcatccacaaaatcgccgagaatctgcgccgccgccccacg
ctcgcggccccgcccgtctccccgctcgacggacacctgacggcgttccggcaggccgcg
gcggatttcgcgggcttcatggatggcgcggccgcggccgagcccgaaacggtgacgatc
gtcgagcgcctggccgaaatggcgaccgccgtggcgaacggtcccgatcccgcgacgcct
gcgggcctcgtccggctcctgaccgcccgtccccacccggacctatgcaccaaggccggt
gccttcgcctcctaccgcaagaagggcaaatgggccgccgcagcgaaggaggctggtctt
tccaaggccgacggcgagcgactgaacgacgccgcggagacccactacaccgcctgctgc
gacgcctgggtcgcgcttgtgcaggccgccgccagccatgccctggcggcggtgatcgac
gaagcgcgtccaatcctgcaacactatcgcgaccacaagcgcgccagcgcccagctcgat
ttcgacgatctgattttcgccgcgcgcgacttgctgcgcgaccacgatgccgtgcgccgg
gcgctggggcagcgtttcgctcatgtcctcgtcgacgagttccaggacaccgatcccctg
caaaccgaaatcttctggcggttgtgcggcgagccggccgatggcgatgacgactggacc
cggttccaaatccggccgggcgcgctcttcctggtcggcgaccccaagcaggcgatctat
cgcttccggggcgccgatgtcggcgcctatgtgcaggcgcgcgatgccttccgcgcccag
gatcccggcagcctcctgtcgatctccaccaattttcgctcctgcgcctcgatcctcacc
ttcgtcaacgagcgcttcgaggccgtgctctcggccgatgggcagccgggcttcaccgct
ctcgacccgttccatgacgaccggggcggcctgtgcgtggcggccctcgacatcgccgtg
gccgacgaaaacggcaaggccagcgccgaacagcagcgcgacgccgaagccgacgccatc
gccgaactgtgcgcccggctgatcgaaagccaccccatcatcgatcgtcgcagcggcgcg
gagcgcctctgccagccgggcgacatcgccttgctggcgccgaccggcgcggagttgtgg
cgctatgaggaagccctggagcgccgcggcatccccgtggcgacccaggccggcaagggg
ctgttccgccgccaggaaatccaggacctgatcgcgctgacccgtgtcctcgccgatcgc
cgcgacacgctggcgctcggcgcgctcctgcgcgggcctctggtcggcctcaccgaggaa
aacctgctggacatcatctgggcgcttcctcgctcggaggaacagccggatcggattccg
cgcctggatctcagcatcgaccccgccctcatcacgcacccgctcgcgcgcgaggtcatc
gaacggctgcaatctctctcccggcgcggtaacagcacgaccccgcacgagctgctctcg
caggccgtggacgtgatgcgcgttcgcccgctcctcctcgagcgccatcgcggtcaagcc
gagcgcgcgctcgccaatgtcgatctctatctcagcctgtcgaccagctacgccgtgcgc
ggcctgcgcgccttcgccgaggcgatgacaacggcgtggtccgacgaggcgcgcgctgtc
gagggccggcccgacgcgcaggaagaagccgttgcgctcttcaccatgcacgcggccaag
gggctggaatggccgatcgtcattcctgtgaacaccatgaccggcgtcatggcgcccgag
aacgcggtcatcgaccgccagacggaaaccttcttctgcccggtcctgggcgtcccgccc
gagggatacgagacggcgcgtgaggcggaaaaggacgaactggatcgcgaacgcatccgc
ctctggtacgtcgcggccactcgcgcccgcgaactcctcgtcctgccccggctcgacacc
acaccgtcgaagtccgcctggatcggtctcgtcgacctgtccctcgccgagttgcccggt
ctggacatctcccacctgcccgacagcatcacggcggcaggggctggagcggccaatgcc
cagacacgcgcgagcttcgccgccgaagccgaagccatcgccgccacgcagacgcggttg
acctggcttgcgcccagccgcgacgagagcgccgccgggacggtgctgcgggaagaagag
cctgccctctggacggggtcggccgacgaccaacctcccgaactggaagataccgccctc
gtacagggcggccgggagcgcgggctgatcctccacaaactcatggaagaggtgctgacc
ggcgaaaccccagaggcgaaagccgccctgaccgaaagggccgccgaactcatccgcgcc
ctcggccggtctccggtcgccgatccggcgacggggctgtcggcccaggaactggcggac
tgtgtcacccggaccctggccctccccgacatcgcggcccttcggccaggccttctggcc
gaattccccgtctatgccgcacaggcggctgagggcgtggaaaccgcaacggccgggatc
gccgacgcactgacagttggcggcgatggccgcccggtcgtggtcgtcgactggaagagc
gacgtgaaccccgacgctcagacgctcgaccactatcgggctcaggtccgcgcctatctc
gatatgaccggcgccgaacgcggactgatcgtcctgatgacgaggggaacggtagtcgtc
gtctcgccctcgccgcagacggtggcagcctga
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