Streptococcus intermedius B196: SIR_0406
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Entry
SIR_0406 CDS
T02830
Symbol
msmE
Name
(GenBank) ABC transporter, substrate-binding protein
KO
K10120
fructooligosaccharide transport system substrate-binding protein
Organism
sib
Streptococcus intermedius B196
Brite
KEGG Orthology (KO) [BR:
sib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sib02000
]
SIR_0406 (msmE)
Transporters [BR:
sib02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Fructooligosaccharide transporter
SIR_0406 (msmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
SBP_bac_6
NAR2
DUF1931
Motif
Other DBs
NCBI-ProteinID:
AGU75780
UniProt:
T1ZD17
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All DBs
Position
385782..387095
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AA seq
437 aa
AA seq
DB search
MRKGIVLSMVAALSIGVLTGCSGSSNKSSKSASNDVKVWVQFSDETAEGKAWEKVVQNFN
KKYRGKYKVTTEYIPRSGSGGGYEDKVNAAISTNSLPDVITLDGPNTAAYAKSKVIAPLD
KYLKDNNMDDVLDSIKQQGTYDGKFYAFGYSESNVGIYYNKKMFKEAGIDEASLPTLKKP
WTWDEFKAISQKLKNHFKEAAIDFRLNSNDEMLPYAYMPLIWSNGGTVVNKKGTKAAGYF
NAKESVEAVQFIQDLIKQGYTTVSPVEKGFETGKYPMVLSGSWTIADLQTNYKDIDFGIL
PYPVSNKTKKLVSPSGSWQLAVTTKSNKKVAAAEFVKFATNTESSEILSLGNSVLPIRKS
TIKNMQNKVSEPMKFLMEQNAATAHARPVVVAYPQVSRAFQQAMQDISYYKENPSVQKVL
DSRAKEMQTAIDDSLNK
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaaggtattgttctatcaatggttgcagctttgtcaatcggagtgttaacaggt
tgtagtggaagttctaataaaagttcaaagagcgcatccaatgatgtaaaagtttgggtt
caattttctgatgaaactgctgaaggaaaagcttgggaaaaagtcgttcaaaactttaac
aaaaaatataggggtaaatacaaagttacgacagagtatattcctcgtagtggaagcgga
ggcggatacgaagataaggttaatgctgccatttcaacgaatagccttcctgatgtgatt
acacttgatggtcccaacacagctgcttatgcaaaatcaaaagttattgcaccattagat
aagtatctaaaagataacaacatggatgatgttcttgatagtatcaagcaacaaggtact
tatgatgggaaattctatgcttttggctattcagagtcaaacgttggtatttattataat
aaaaaaatgttcaaagaagctggtatagatgaagcaagcttgccaactttgaaaaaacct
tggacttgggatgaatttaaagcgattagccaaaaattaaaaaatcattttaaagaagct
gcgattgatttccgccttaattcaaatgatgaaatgttgccatatgcttatatgcccctg
atttggtcaaatggtggtacggttgtcaataaaaagggaacaaaggctgcaggctatttt
aatgccaaagaaagcgtagaagcagttcaatttattcaagatcttattaaacaagggtat
acaacagttagcccagttgaaaaggggtttgaaaccggaaaatatccaatggttttgagt
ggttcgtggacaattgctgacttacaaactaattacaaagatattgatttcggtatttta
ccatatccggtatctaataagacaaagaaattagtctctccttcaggaagctggcaattg
gcagtcactactaaatctaataaaaaagtagcagcggctgaatttgtcaaatttgcaacc
aatacagaatcaagtgaaatcttaagcttggggaatagcgttttgccaattcgtaaatca
actatcaagaatatgcaaaataaggtttctgaaccaatgaaattcttgatggaacaaaat
gcagcgactgctcatgcgcgtccagttgttgtagcttatccacaagtatctcgggcattc
caacaagctatgcaagatattagttattataaggaaaatccaagtgttcaaaaagtacta
gattcacgtgcaaaagaaatgcaaacagcaattgatgattccttgaacaaatag
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