Streptococcus intermedius JTH08: SCIM_0492
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Entry
SCIM_0492 CDS
T02156
Name
(GenBank) conserved hypothetical protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sie
Streptococcus intermedius JTH08
Pathway
sie03030
DNA replication
sie03430
Mismatch repair
sie03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SCIM_0492
03430 Mismatch repair
SCIM_0492
03440 Homologous recombination
SCIM_0492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sie03032
]
SCIM_0492
03400 DNA repair and recombination proteins [BR:
sie03400
]
SCIM_0492
Enzymes [BR:
sie01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SCIM_0492
DNA replication proteins [BR:
sie03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SCIM_0492
DNA repair and recombination proteins [BR:
sie03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SCIM_0492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
BAM23146
LinkDB
All DBs
Position
557125..558162
Genome browser
AA seq
345 aa
AA seq
DB search
MLAIEECKAVNLTNLPSLTILTGDDTGQFEWMKSQFLHQIQYDIADLNVAYFDMKEAAYP
DVEIDLVSLPFFSEEKIVILDHLLDITTAKKRYLTDEELKSFEQYLENPADTTKLVIFAE
GKLDSKRRIVKLLKRDGKIFEASEPKEQELRTYFSKQVQEQGLELRSQVLEELLIKSGFD
FSEISKNLAFLRDYKKDGIITSEDISEAIPKTLQDNIFDLTQMILHQKVDAARSLVRDLT
LQGEDEIKLIAIMLGQFRIFAQVKILFENGRNESQIVADLSSYLGRKVNPFQIKYALRDV
RSLPLKALQKSLSCLIETDYQIKSGVYEKGYLFDLALLKIMTHNL
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
gtgttagcgattgaagagtgcaaagctgtaaatctgacaaatctacctagtttaacgatt
ttgactggtgatgatacaggacaatttgaatggatgaaatcacaatttttgcatcaaatt
caatatgatattgcagatttaaatgtagcttatttcgatatgaaagaagctgcttatcca
gatgtggagatcgatttagtgagtttgcccttcttttccgaagagaaaatcgttattttg
gatcatcttctggacataacaactgctaaaaagcgctatttgacagatgaggaattaaaa
tcttttgagcaatatttggaaaatcctgcagatacgaccaaattagtcatttttgcagaa
gggaagttagacagtaaacggcgaattgtaaaattgctcaagcgagatggtaaaattttt
gaagcaagtgagcccaaagaacaagaattacgcacctactttagtaagcaagttcaagaa
caggggttagaacttcgttcgcaagttttagaggaattgcttattaagtctggtttcgat
tttagtgaaattagtaaaaacttagcttttttaagggattataaaaaagatggcatcatt
acaagcgaagacatttctgaagcaattccaaaaactttacaggataatatttttgacttg
actcagatgattttgcatcaaaaggtggacgcagcgagaagtttggtacgagatttgact
ttgcaaggtgaagatgaaatcaagctgattgcgattatgttgggccagtttcgtatattt
gcgcaagtgaaaatcctctttgaaaatggacgtaatgaaagccagattgtagcagatttg
tctagttatttgggacgaaaggtgaatccttttcaaattaaatatgccttgcgtgatgtc
cgctcattacccttgaaagctttacaaaagtctctctcctgcttgattgaaacagattat
cagattaaatcaggagtttacgaaaaaggttacttatttgacttggctttgttaaagatc
atgacccacaacttataa
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