KEGG   Streptococcus intermedius JTH08: SCIM_1279Help
Entry
SCIM_1279         CDS       T02156                                 

Gene name
gatA
Definition
(GenBank) aspartyl/glutamyl-tRNA amidotransferase subunit A
  KO
K02433  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Organism
sie  Streptococcus intermedius JTH08
Pathway
sie00970  Aminoacyl-tRNA biosynthesis
sie01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:sie00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    SCIM_1279 (gatA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:sie03029]
    SCIM_1279 (gatA)
Enzymes [BR:sie01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     SCIM_1279 (gatA)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     SCIM_1279 (gatA)
Mitochondrial biogenesis [BR:sie03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    SCIM_1279 (gatA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Amidase
Motif
Other DBs
NCBI-ProteinID: BAM23933
LinkDB All DBs
Position
complement(1459745..1461211)
Genome map
AA seq 488 aa AA seqDB search
MTFNHKTIEELHDLLVKKEISAVELTQATLADIKEREEAVDSFITVSEEEALAQAAALDA
KGIDADNLMSGIPLAVKDNISTKGILTTAASKMLYNYKPIFDATSVEKLYGKDMIIIGKT
NMDEFAMGGSSENSYFKTTKNAWDSSKVPGGSSGGSATAVASGQVRLSLGSDTGGSIRQP
ASFNGVVGLKPTYGRVSRFGLIAFGSSLDQIGPFSQTVKENAQLLNVISGNDPKDSTSSQ
EAVPDFTSKIGQDIKGMKIALPKEYMGEGIDSKVKETILAAAKHLESLGAIVEEVSLPHS
KYGVAVYYIIASSEASSNLQRFDGIRYGYRAEGIENLEDVYVKSRSKGFGDEVKRRIMLG
TFSLSSGYYDAYFKKAGQVRTLIMQDFAKVFEKYDLILGPTAPTVAYDLGSQNQDPVAMY
LADLLTIPVNLAGLPGISIPAGFVDGLPVGLQLIGNHFDEATIYQAAAAFEATTDYHKQQ
PVIFGGEK
NT seq 1467 nt NT seq  +upstreamnt  +downstreamnt
atgacttttaatcacaagaccattgaagaactgcacgacttgctggtcaagaaagaaatt
tctgcggtagagttaactcaggcaactttggctgacattaaagaacgtgaagaagctgtt
gacagcttcattactgttagcgaagaggaggcattggcccaggctgcggctctggacgct
aaggggattgatgccgacaatcttatgagcggaattccgctggcagtcaaggataatatc
tcaaccaagggaattttgacgacggctgcatctaaaatgctctacaactacaagccgatt
ttcgatgcgactagcgtggagaagctttacggcaaggacatgattatcatcgggaagacc
aacatggacgagtttgctatgggtggctccagcgaaaactcttactttaagacgacaaaa
aatgcatgggatagcagtaaggttcctggtggatcatctggtggttcagcaacagctgtt
gcctctggtcaggttcgtctgtcgctgggatcagatacaggtggctccattcgccagcca
gcttcctttaacggtgtagtcggcctcaagccaacctacggacgggtttcccgcttcggt
cttattgcttttggttcttctttagaccagattgggcctttctctcaaacggttaaggaa
aatgcacagcttctgaatgttatttctggtaatgatcctaaggattcgacatcgtcacaa
gaagctgtgccagactttactagcaagattggccaagacatcaaggggatgaagattgcc
ctgcctaaggaatacatgggtgagggaattgacagtaaggtcaaggaaacaattttagca
gcagcgaagcacttggaaagtctaggagctatcgttgaagaagtcagcctacctcacagc
aagtacggcgtggcagtctactatattattgcttcttctgaagctagttctaacctgcaa
cgttttgatggtattcgctatggctaccgcgcagaaggcattgaaaatctagaagatgtc
tatgtcaaatctcgcagcaaaggctttggtgatgaggtgaaacgccggatcatgctggga
actttcagtttgtcatctggatactatgatgcctacttcaagaaagctggtcaggttcgg
accttgattatgcaagattttgccaaggtatttgaaaaatatgacttaatcttaggtcca
actgcaccaacagtagcatatgacttgggcagtcaaaaccaagatccagtggccatgtat
ctggctgatcttttgaccattccagtcaatttggctggcctgccgggcatttcaatccca
gctggctttgtagatggtcttcctgtcggcttgcagctgattggtaaccacttcgatgaa
gcgaccatctatcaggcagccgcagcatttgaagcgacgactgactaccacaaacagcag
ccagttatctttggaggtgaaaaataa

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