Streptococcus infantarius subsp. infantarius: Sinf_0638
Help
Entry
Sinf_0638 CDS
T01765
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sif
Streptococcus infantarius subsp. infantarius
Pathway
sif03410
Base excision repair
sif03430
Mismatch repair
sif03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Sinf_0638 (recJ)
03430 Mismatch repair
Sinf_0638 (recJ)
03440 Homologous recombination
Sinf_0638 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sif03400
]
Sinf_0638 (recJ)
DNA repair and recombination proteins [BR:
sif03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Sinf_0638 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Sinf_0638 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Sinf_0638 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
DUF642
Motif
Other DBs
NCBI-ProteinID:
AEZ61986
LinkDB
All DBs
Position
668177..670381
Genome browser
AA seq
734 aa
AA seq
DB search
MITSKYNWKNIEKEPDDGFFEVTKKENITALASKILFSRGIDNGEKLAQFLSNDLSQLHD
PYLLHDMDKAVARIRQAIENYEQILIYGDYDADGMTSASIMKEALEMLGAEVQVYLPNRF
VDGYGPNESVYKYFIEQQQVSLIITVDNGVAGHEAISYAQSQGVDVIVTDHHGLPAELPD
AFAIVHPEHPEADYPFKYLAGCGVAFKVACALLESIPTEMLDLVAIGTIADMVSLTDENR
IMVKVGLEMLKQTERIGLMELMKVSDIDMSDVNEETVGFKIAPQLNALGRLDDPNPAVEL
LTGFDDEEALSIAQMINAKNEERKEIVQKIYDEAMGMVDLDKPVQVLAKEGWHPGVLGIV
AGRILEHIAQPVIVLNIEDGMAKGSARSTEAINIFHALDEHRDLFEAFGGHAGAAGMTLP
VDNLEQLSQVLCDYIAENDINLAQKKTLIIDEVLDLSEIDLDTVKSLDKIAPFGMDNAKP
VFEIKDFTVKQARTMGQNDAHLKLKIAQGSTAVDLVAFNQGHLVQEFQQAQNLCLAVTLS
INKWNGQTTVQLMLEDARVDGVQLIDIRAKNASLPERVPVLSEDTSASEVVVLDIPEKAE
ELKSLFVGRQFDAVYFKNHIKRAYYLTGYGTREQFAKLYKTIYQFPEFDVRYKLKDLSQY
LNIPDILLVKMIQIFDELDFVTITDGVMVVNKDAQKRSISDSQIYQNLKQEVKYQELMAL
GTPQEIYDWLMDNN
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgataacaagtaaatacaattggaaaaacattgaaaaagagccagatgatggctttttt
gaagtgacaaaaaaagaaaatataacggcattagccagcaaaattctattcagtcgaggc
attgataatggcgaaaaactagctcaatttttatcaaatgatttatcacaacttcatgat
ccatatttgttgcatgatatggacaaggcagttgctcgcattcgtcaagctattgaaaat
tacgaacagattctaatctatggtgactatgatgccgatggtatgactagcgctagcatt
atgaaagaagcgttggaaatgcttggggctgaggttcaagtctatcttcctaaccgattt
gttgatggctatggaccaaatgaatcggtctataaatactttattgagcaacaacaggtt
tctttgattattacggtggacaatggcgtagctgggcatgaagctattagctatgcacaa
agtcaaggagtagatgtcattgttactgaccaccatggcttaccagcagagcttccagac
gcatttgccattgtacatccagagcacccggaagcggattatccgttcaagtatttagca
ggatgtggtgtagctttcaaagtagcttgtgccttgttggaatcaattcctacagaaatg
ctagatttagttgctatcggaaccattgctgatatggttagcctaacagatgaaaatcgt
atcatggttaaggttggccttgaaatgctcaagcagaccgaacgcattggtctcatggag
cttatgaaagtatctgatattgacatgtcagatgttaatgaggaaactgttgggtttaaa
attgcaccgcagctaaatgctcttggtcgtctagatgatcccaatccagctgttgagtta
ttgactggctttgatgatgaagaagcgctaagcattgcgcaaatgattaatgccaaaaat
gaagaacgtaaagaaatcgttcaaaagatttatgacgaagccatgggcatggttgacctt
gataagcctgttcaagtgttagcaaaagaaggctggcatccaggtgttcttgggattgtc
gctggtcgtattttggagcatattgctcagccagttattgtcttaaacattgaagacggc
atggcaaaaggttctgctagaagtactgaggctatcaatatcttccatgcgcttgatgaa
catcgtgatttatttgaagcctttggtggacatgctggcgcagctgggatgaccttgccc
gttgataacttagagcaattgtcacaggtcttgtgcgattacattgctgaaaatgatatt
aatttagctcagaaaaagactttgatcattgatgaagtgctagacttgtcagaaatcgac
ttggacactgttaaaagtcttgataagattgcaccttttgggatggataatgctaagcca
gtctttgaaatcaaagactttaccgttaaacaagcacgtaccatggggcaaaatgatgcc
cacttgaagttaaaaattgctcaaggaagcacggcagttgaccttgttgcctttaaccaa
ggtcatttggtacaagaatttcaacaagcacagaatctctgtcttgcggttaccttgtca
atcaacaaatggaacgggcaaaccactgttcagttgatgcttgaagatgcgcgtgttgac
ggcgttcagttgattgatattcgtgctaaaaatgccagccttcctgaacgtgttcctgtt
ttgagtgaagacactagtgctagtgaagtggttgttctggacatccctgagaaggctgaa
gaactcaaatcactttttgttgggcgacaatttgatgctgtttattttaaaaaccacatc
aaacgtgcctattatttgacaggctatggaactcgcgaacaatttgctaaattgtataaa
accatttaccaattccctgaatttgatgttcgttataaactaaaagacttgagtcaatac
cttaatatcccagatattttgctggtgaaaatgattcaaatctttgatgaattagacttc
gtaaccatcacagatggtgttatggttgttaacaaagatgctcaaaaacgtagcatctca
gatagccaaatttatcaaaacctgaaacaagaagtgaagtaccaagaactcatggcactt
ggtaccccacaagaaatttatgattggttaatggataataattaa
DBGET
integrated database retrieval system
