KEGG   Streptococcus iniae SF1: K710_0614
Entry
K710_0614         CDS       T02686                                 
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
sik  Streptococcus iniae SF1
Pathway
sik03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sik00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    K710_0614
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sik03019]
    K710_0614
   03009 Ribosome biogenesis [BR:sik03009]
    K710_0614
Enzymes [BR:sik01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     K710_0614
Messenger RNA biogenesis [BR:sik03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     K710_0614
Ribosome biogenesis [BR:sik03009]
 Prokaryotic type
  rRNA helicases
   K710_0614
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 Helicase_RecD
Other DBs
NCBI-ProteinID: AGM98393
LinkDB
Position
583566..585197
AA seq 543 aa
MKFTELNLSEDIQSAVVTAGFEKASPIQEMTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
NKIRTDDNIIQALVIAPTRELAVQSQEELFRFGRDKGVKVRSVYGGSSIDKQIKALKSGA
HIVVGTPGRLLDLIKRKALKLEHVETLILDEADEMLNMGFLEDIEAIISRVPEERQTLLF
SATMPAPIKQIGVKFMKNPEHVQIKNKELTNVNVEQFYVRVKEQEKFDTMTRLMDVQQPE
LAIVFGRTKRRVDEITRGLKLRGFRAEGIHGDLDQNKRLRVIRDFKGDQIDILVATDVAA
RGLDISGVTHVYNYDITQDPESYVHRIGRTGRAGKTGESITFVSPNEMGYLSMIETLTKK
QMLPLKPATAEEAFQAKKKIALKKIERDFADETIRSNFDKFKGDAIQLASEFTPEELALY
ILSLTVQDPDTLPEVEIAREKPLPFKYVGGGHGGGKKGKGGRGRDNRGRGGRDGDRRGGY
RGDRNRDDRDNDRRRNKRDKRDNHDASASGSRKPKRNAKEFYNKDKKSGNKKDSGFVIRH
KGE
NT seq 1632 nt   +upstreamnt  +downstreamnt
ttgaaatttacagaattaaacttatcagaagacatccaatcagctgttgtaacagcaggt
tttgaaaaagcatctcctattcaggaaatgactattccattagctttggaaggtaaggat
gttattggtcaggctcaaacaggaactggtaaaacagctgcatttggtcttccaaccttg
aataagattcgcacggatgacaatatcatccaagcattagtgattgcaccaacgcgtgaa
ttagcggtacaaagtcaagaagaacttttccgttttggtcgtgataaaggtgttaaagtt
cgctctgtatatggcggatcaagtattgataaacaaattaaagcattgaaatccggtgct
catattgttgttggtacaccaggtcgtttactagaccttatcaaacgtaaagcattgaaa
ctagaacatgttgaaacattgattcttgatgaagctgatgaaatgttaaacatgggcttc
cttgaagatattgaagctattatcagtcgtgttcctgaagaacgtcaaacgctcctattt
tcagcaacaatgcctgctccaattaaacaaattggtgttaagttcatgaaaaatcctgaa
catgttcaaattaaaaacaaagaattaacaaatgttaatgttgaacaattctacgttcgt
gttaaagaacaagaaaaatttgacaccatgacacgtcttatggacgttcaacaaccagaa
cttgctattgtttttggtcgtacaaaacgtcgtgttgatgaaattacccgtggtcttaaa
ttacgtggtttccgtgcagaaggtattcatggagaccttgatcaaaacaaacgtttacgt
gttattcgtgattttaaaggggaccaaattgatattttagttgcaactgacgttgctgcg
cgtggacttgatatttcaggagttactcacgtttataactacgacatcactcaagatcca
gaaagttatgttcaccgtattggtcgtacgggtcgtgctggtaaaacaggtgagtctatt
acttttgtatcaccaaacgaaatgggttacttgtcaatgattgaaacattgactaaaaaa
caaatgcttccactgaaacctgcaacagcagaagaagcattccaagcgaaaaagaaaatt
gctcttaagaaaattgaacgtgactttgctgatgagactattcgttcaaactttgacaaa
ttcaaaggagatgcaattcaattagcttcagaatttacacctgaagaattagcgctttat
atcttgagtttaaccgttcaagatccagacaccctaccagaagttgaaattgcacgtgaa
aaaccattaccatttaaatatgttggtggtggtcatggcggtggcaaaaaaggtaaaggc
ggccgtggtagagataaccgtggacgtggtggccgtgatggtgaccgtcgtggtggttac
cgtggtgatcgtaaccgtgatgaccgtgataatgaccgtcgtcgcaacaaacgtgataaa
cgtgacaaccatgatgcaagtgctagtggtagccgcaaaccaaaacgtaatgcaaaagaa
ttttacaataaagacaaaaagtctggtaataaaaaggattcaggtttcgttattcgtcat
aaaggtgaataa

DBGET integrated database retrieval system