Streptococcus iniae SF1: K710_1812
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Entry
K710_1812 CDS
T02686
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
sik
Streptococcus iniae SF1
Pathway
sik03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sik00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K710_1812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sik03400
]
K710_1812
DNA repair and recombination proteins [BR:
sik03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K710_1812
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K710_1812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
RsgA_GTPase
AAA_29
nSTAND1
AAA_22
AAA_21
AAA_33
AAA_23
nSTAND3
Viral_helicase1
AAA_18
BCA_ABC_TP_C
NACHT
AAA_14
MMR_HSR1
ATPase
SLFN-g3_helicase
cobW
T2SSE
Septin
YobI-ATPase
NB-ARC
DUF87
DUF4350
AAA_24
PRK
DnaJ_CXXCXGXG
IIGP
DUF463
MeaB
NTPase_1
Dynamin_N
DO-GTPase2
Motif
Other DBs
NCBI-ProteinID:
AGM99562
LinkDB
All DBs
Position
complement(1750693..1753515)
Genome browser
AA seq
940 aa
AA seq
DB search
MQDKLIIRGARAHNLKNIDVEIPRDKLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLSA
YARQFLGNMEKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLYARVGTPY
CINGHGAITASSVEQIVEQVLDLPERSRMQILAPIVRRKKGQQKTIFEKIQKDGYVRVRV
DGEIYDVSEVPELSKSKMHDIEVVIDRLVNKDGIRSRLFDSIEAALRLGDGYLIIDTMDG
NELLFSEHYSCPVCGFTVPELEPRLFSFNAPFGSCSTCDGLGIKLEVDMDLVIPDPSKSL
REGALAPWNPISSNYYPSMLEQAMEAFGVDMDKPYEDLSEDEKQLVLYGSGDREFHFHYV
NDFGGERNIDIVFEGVVTNINRRYHETNSDYTRNVMRTYMNELTCNTCHGYRLNDQALCV
HVGGEQAPHIGQLSELSISDHLNHLENLTLSPNEATIAKPILKEIHDRLTFLNNVGLNYL
TLSRSSGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIESLKKMRDLG
NTLIVVEHDEDTMMQADWLIDVGPGAGAFGGQIIASGTPKQVAKNKKSITGQYLSGKKSI
PLPLERRVGNGRFIEIQGARENNLQNLDVRFPLGKFIAVTGVSGSGKSTLINSILKKAVA
QKLNRNSEKPGKHKTVTGIEHIERLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNE
AKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVPCEVCHGHRYNSETLEVHY
KEKNIAQILDMTVDDAVEFFAAIPKIARKIQTIKDVGLGYVTLGQPATTLSGGEAQRMKL
ASELHKRSTGKSLYILDEPTTGLHTDDIARLLTVLERFVDDGNTVLVIEHNLDVIKSADH
IIDLGPEGGIGGGQIIATGTPEEIAAVPESYTGQYLKEKL
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgcaagataaacttattattcgtggagcgcgtgctcacaatttaaaaaatattgatgtt
gagattcctcgcgacaagttagttgttgtgacagggttgtcaggatcaggaaaatcaagt
ctggccttcgatacgatttatgccgaagggcaacggcgctatgtagagagtctttctgct
tatgcaaggcaatttttagggaacatggaaaaacctgatgtggattctattgatggcctt
agcccagcaatttctatagaccaaaaaacaaccagtaaaaatccacgttcgaccgttggg
acagttacagaaatcaacgactatttgaggttgctttatgctcgtgttgggacgccttac
tgtattaatggtcatggggctattacggcctcatcggttgagcagattgtggagcaggtt
ttggatttgccagaacgtagtcgcatgcaaattttagctcctattgttcgccgaaaaaaa
gggcaacaaaaaaccatttttgaaaaaattcaaaaagatggttatgttcgtgttcgcgtt
gacggtgagatttatgatgtgtcagaagtcccagaattatcaaaaagcaagatgcatgat
attgaagtggtaattgaccgtttggtcaataaagatggcatcagaagtcgtctttttgac
tccattgaagctgctttaaggttaggtgatggttatttaatcattgacactatggatggc
aatgagttgctcttttcggaacattattcttgtccggtttgtggctttactgtgccggaa
ttagaaccccgtcttttttcatttaatgctccttttgggtcttgctcaacttgtgatggt
ttagggattaagttggaagttgatatggacttggttattccagatccaagtaaaagtttg
agagaaggggcgttggcaccttggaatcctatttcatctaattattacccatccatgtta
gaacaggccatggaggcctttggtgtggatatggataaaccttatgaagatttgtcagaa
gatgagaagcagttggtcttgtatggttctggtgatcgagaattccattttcattatgtc
aatgattttggcggcgaacgcaatattgatattgtctttgaaggtgttgttacaaatatc
aatcgtcgctaccatgaaactaatagtgattacacacgaaatgttatgcgcacctacatg
aatgagctaacatgtaacacttgtcatggctatcgccttaatgaccaagctttatgtgtt
catgtaggaggtgaacaggcgcctcatattggtcaattatcagagttatcaatttctgat
catttaaaccatttggaaaacttaacattgagtccaaatgaagcaaccattgctaaaccc
attcttaaagaaattcatgatcgcttgacattcttgaataatgttggactcaactatttg
accctctctcgttcttcggggactctttctggtggtgagagccaacggattcgactagca
acgcaaattggctctaatttatcgggtgtactctacattcttgatgaaccttcaattggt
ttgcaccaaagggataatgacaggctcattgaaagccttaaaaagatgcgagatttgggc
aataccttgattgttgttgaacatgatgaagatactatgatgcaggcggattggctgatt
gatgttggtccgggcgcaggcgcatttggtggccagatcattgcatcggggactcctaaa
caagtggctaaaaataaaaagtccattacaggacagtatttgtctggcaaaaaatcaatc
cccttaccgctggaacgtcgcgtgggaaatggtcgttttattgaaatacagggtgcccgt
gaaaacaacttacagaatctagatgttcgtttcccactgggaaaattcattgccgttacc
ggtgtatctggttcagggaaatccaccttgattaatagcattttgaaaaaagcagtagct
caaaagctaaatcgtaattctgaaaagccaggtaaacacaagacagtaaccggtattgag
catattgaacgtcttattgacattgatcaaagcccgataggacgcacaccaaggtcaaac
ccagcaacctatacgggtgtttttgatgatattagggacctgtttgctcagaccaatgaa
gccaaaattcgtggttataaaaaagggcgcttctcctttaatgtcaaaggggggcgttgt
gaagcttgctctggtgatggtattatcaaaattgagatgcactttttaccagacgtttat
gttccatgtgaagtctgtcatggtcacaggtataattctgagacacttgaagttcactat
aaggaaaaaaacattgctcaaattttagacatgacagttgatgatgcagttgagttcttt
gcggcaattcctaagattgcacgtaagattcaaaccattaaagatgttggtctaggttat
gtcacccttggacaacctgcaacgactttatctggtggagaagcacaacggatgaagtta
gccagtgaactgcataaacgttcaactggtaagagcctttatattcttgatgaaccaact
actggcttacatacagatgacattgcgcggctgcttactgtcttagagcgttttgttgat
gatggcaacactgttttagttattgaacataacttagatgtgattaaatcagctgaccac
atcattgatttaggaccagaagggggaatcggcggcggacaaatcattgccaccggcaca
ccagaagaaatcgcagcggtcccagaaagttataccggacaatacctaaaagaaaaatta
taa
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