Ruegeria pomeroyi: SPO0587
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Entry
SPO0587 CDS
T00215
Name
(GenBank) hypothetical protein
KO
K26065
L-pipecolate oxidase
Organism
sil
Ruegeria pomeroyi
Pathway
sil00310
Lysine degradation
sil01100
Metabolic pathways
sil01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
SPO0587
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GFIT
Motif
Pfam:
DAO
FAD_binding_2
Pyr_redox_3
Pyr_redox_2
FAD_oxidored
HI0933_like
NAD_binding_8
GIDA
AlaDh_PNT_C
Pyr_redox
FAD_binding_3
Thi4
NAD_binding_9
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AAV93902
UniProt:
Q5LVV8
LinkDB
All DBs
Position
602992..604269
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AA seq
425 aa
AA seq
DB search
MSDNTRTLWHLTSAEQVTAPPLAGDVTADLVVIGGGFTGLSAALHAAEQGADVRLVEAEA
PGHGGSGRNVGLANAGLWLPPDDIRAHLGDAVGNRLIALLAGAPALVFELIARHGIACEP
VRSGTLHCAHSPSGLADLCRRHAQLTASGAPVELLSAEETTRRTGSGAFHGALFDPRAGT
IQPLAYACGLARAAQAAGARLHGQSPALEIEHKDGAWQVRTSGGSIRARKLIQATNAYHR
GLADRRPAHVPVHYFQYATDPLPEKTRAAILPGGEGCWDTGLIMTSFRLDRAGRMIIGGM
GALDHPASGIHRAWVRRKLAQLYPALSRQPLVTGWHGRIAMTGDHIPKITRPGPGALAAH
GYSGRGIGPGTLFGKAMAEALLSGIETNLPIPAIDRHAERWTALQQAYVETGATLMHLIR
ARVGY
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacaatacccgcactctctggcatctgacctcggccgaacaggtcaccgcgccg
ccgctggcgggggatgtgaccgccgatctggtggtgattggtggcggtttcaccggtctg
tcggcggcgctccacgccgcggagcaaggcgccgatgtgcgcctggtcgaggctgaggcg
ccgggccatggcggatcgggccgcaatgtcgggctggccaatgcggggctgtggctgccg
cctgacgatatccgcgcccatctgggcgatgcggtgggcaaccggctgatcgcgctgttg
gccggggcgccggcgctggtgttcgagctgatcgcgcgccatggcatcgcctgcgagccg
gtgcggagcggcacgctgcattgtgcgcattccccctcggggctggccgatctgtgccgc
cgccatgcgcaactgaccgccagcggggcgccggtcgaactgctctcggccgaggagacc
acccgccgcaccgggtccggcgcctttcacggcgcgctctttgatccgcgcgcgggcacc
atccagccgctggcctatgcctgcgggctcgcccgcgccgcgcaggcggcaggcgcgcgg
ttgcacgggcaaagcccggcgctggagatcgagcacaaagacggggcctggcaggtgcgc
acctccggcggcagcatccgggcgcgcaaactgatccaggccaccaacgcctatcaccgg
gggcttgccgaccgaaggcccgcccatgttccggtgcattatttccaatatgccaccgat
ccgctgccggagaagacccgtgccgccatcctgccggggggcgaagggtgctgggatacc
gggctgatcatgacctcgttccgactggaccgggccgggcggatgatcatcggcggcatg
ggggcgctggaccatccggccagcggcatccaccgggcctgggtgcggcgcaagcttgca
cagctttatcccgccttgtcgcggcagccgctggtcaccggttggcacgggcgcatcgcc
atgaccggcgatcacatccccaagatcactcgccccggcccaggcgcgctggcggcgcat
ggctattccgggcgcggcatcgggccgggcaccctgttcggcaaggcgatggccgaggcg
ctgctgagcggaatcgagaccaatctaccgatccccgccatcgaccgccatgccgagcgc
tggaccgccctgcaacaggcctatgtcgagaccggcgccacgctgatgcatctgatccgg
gcgcgcgtgggttactga
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