Ruegeria pomeroyi: SPO2218
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Entry
SPO2218 CDS
T00215
Symbol
uvrA
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
sil
Ruegeria pomeroyi
Pathway
sil03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SPO2218 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sil03400
]
SPO2218 (uvrA)
DNA repair and recombination proteins [BR:
sil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SPO2218 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SPO2218 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_25
nSTAND1
RsgA_GTPase
DUF4350
DnaJ_CXXCXGXG
AAA_21
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AAV95484
UniProt:
Q5LRB1
LinkDB
All DBs
Position
complement(2357529..2360444)
Genome browser
AA seq
971 aa
AA seq
DB search
MAEQKFIEVRGAREHNLKGIDVDIPRDQLVVITGLSGSGKSSLAFDTIYAEGQRRYVESL
SAYARQFLDMMEKPDVDHISGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLFARAGT
PYSPATGQPIEAQQVQDMVDRIMAMEEGTRGYLLAPIVRDRKGEYRKEFLELRKQGFQRV
KVDGQFYELDEPPTLDKKFRHDIDVVVDRIVVREGLETRLADSLRTALDLASGIAILETA
PRDGSSAPGGASSPGEEGSQETEEPLRITFSENFACPVSGFTIPEIEPRLFSFNAPYGAC
PKCDGLGVELFFDERLVVPDQSLKVYDGALAPWRKGKSPYFLQTIEAIARHYQFDKNTPW
KDLPEKVQQVFLRGSGDEEIPFRYDEGGRVYQVTRSFEGVIPNMERRYRETDSNWIREEF
EQYQNNRPCGACGGFRLKPEALAVKIAGLHVGQVVQMSIREALAWAEAAPASLSKQKTEI
AQAIFKEIRERLGFLNNVGLEYLTLSRSSGTLSGGESQRIRLASQIGSGLTGVLYVLDEP
SIGLHQRDNDRLLTTLKNLRDQGNTVIVVEHDEEAIREADYVFDIGPGAGVHGGQVVSHG
TPAQIAADAASVTGQYLSGSREISVPAERRHGNGKKLTVVKATGNNLREVTADFPLGKFV
CVTGVSGGGKSTLTIETLFKTASMRLNGARQTPAPCETIKGLEFLDKVIDIDQRPIGRTP
RSNPATYTGAFTPIRDWFAGLPEAKTRGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLP
DVYVTCETCKGARYNRETLEVKFKGKSIADVLDMTVEDAQEFFKAVPSIREKMDALSRVG
LGYIKVGQQATTLSGGEAQRVKLSKELSRRSTGRTLYILDEPTTGLHFEDVRKLLEVLHE
LVEQGNTVVVIEHNLDVVKTADWIIDIGPEGGDGGGMIVAEGTPEDVAASERSHTGRYLK
PMLNPERVAAE
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcagaagttcatcgaggtacgcggcgcgcgcgagcataatctcaaggggatc
gacgtggatattccgcgcgatcagctggtggtgatcaccggcctttccggctcgggcaag
tcgagcctggcctttgacacgatctatgccgaagggcagcggcgctatgttgaaagcctc
agcgcctatgcccgccagttcctggacatgatggaaaagccggatgtggaccatatcagc
ggtctttccccagcgatttccatcgagcagaagaccaccagcaagaacccgcgctcgacc
gttggtacggtgaccgagatctatgactatatgcggctgttgttcgcgcgcgcgggcacg
ccctatagcccggccaccggccagcccatcgaggcgcagcaggtgcaggacatggtcgac
cggatcatggcgatggaggagggcacgcgcggctatctgctggcccccatcgtgcgcgac
cgcaagggcgaataccgcaaggaattcctggagctgcgcaagcagggctttcagcgggtc
aaggtggatggccagttctatgaactggacgagccgccgacgctcgacaagaagtttcgc
catgacatcgacgtggtggtggaccgcatcgtggtgcgcgaggggcttgaaacccggttg
gccgacagcctgcgcaccgctttggatctggcctcgggcatcgcgatcctggagaccgcg
ccacgggacggctcctcggccccgggcggggcctcttcgcccggcgaggagggctcgcaa
gagaccgaagagccgttgcgcatcacattttcggaaaactttgcctgtccggtctcgggc
ttcaccatccccgagatcgaaccgcgcctcttctcgttcaacgccccctatggcgcctgc
ccgaaatgcgacggcctgggggtcgagctgttttttgacgaacgcctcgtggtccccgat
cagagcctcaaggtctatgacggtgcccttgcaccctggcgcaagggcaagtcgccctat
ttcctgcaaaccattgaggcgatcgcccgccattaccagttcgacaagaacaccccgtgg
aaggatctgcccgagaaggtgcaacaggtgttcctgcgcggttcgggcgacgaggaaatc
ccgttccgctatgacgagggtggccgcgtctatcaggtcacccgcagtttcgaaggcgtc
atccccaacatggaacgccgctatcgcgagaccgacagcaactggatccgcgaggagttc
gagcagtatcagaacaaccgcccctgcggggcctgtggcgggttccggctgaagcccgag
gcgctggcggtcaagatcgcgggcctgcatgtgggtcaggtggtacagatgtcgatccgc
gaggcgctggcctgggccgaggccgcaccagcttcgctgagcaaacagaaaaccgagatc
gcccaggccatcttcaaggaaatccgcgagcggttgggtttcctgaataacgtgggattg
gaatatcttacgctctcacgttcaagtggaacgctgtcgggcggcgaaagccagcgcatc
cgcctggccagtcagatcggctcgggcctgaccggcgtgctctatgtgctcgacgaaccc
tcgatcggcttgcaccagcgcgacaacgaccgcctgctgaccacgctcaagaacctgcgc
gatcagggcaacacggtgatcgtggtcgaacatgacgaggaagcgatccgcgaggcggat
tacgtctttgatatcggccccggtgcgggtgtccatggcgggcaggtggtcagccacggc
acgcccgcccagatcgccgccgatgcggcctcggtcaccgggcaatacctgtcaggcagt
cgcgagatttcagtccctgccgaacgccgccacggcaatggcaaaaagctgacggtggtc
aaggccaccggcaacaacctgcgcgaggtcaccgccgatttcccgctgggcaaattcgtc
tgcgtcaccggtgtgtcgggcggcggcaagtcgacgctgaccatcgaaaccctgttcaag
accgccagcatgcgcctcaacggcgcccgccagacgcccgcaccctgcgagacgatcaag
gggctggaattcctcgacaaggtgatcgatatcgaccagcgcccgatcgggcgcaccccg
cggtcaaaccccgccacctataccggcgcgttcaccccgatccgcgactggtttgcgggc
ttgcccgaggccaagacgcgcggctacaagccgggacggttcagcttcaacgtcaagggt
ggccgttgcgaggcctgccagggcgacggtgtcatcaagatcgagatgcattttctgccc
gacgtctatgtcacctgcgaaacctgcaagggcgcgcgctataaccgcgagacgctggag
gtgaagttcaaagggaagagcatcgccgatgtgcttgatatgactgtggaagacgcgcag
gagttcttcaaggcggtgccgtcgatccgtgaaaagatggatgcgctgtcgcgcgtcggt
ctcggctatatcaaggtcggccagcaggccacgacgctttcgggcggcgaggcgcagcgg
gtgaagctcagcaaggaactcagccgccgctcgacgggccgcacgctctatattctcgat
gaacccaccacaggcctgcatttcgaggatgtgcgcaaactgctcgaagtgctgcatgag
ctggtcgaacagggcaacacggtggtggtgatcgaacacaatctggacgtggtgaaaacc
gccgactggatcatcgacatcggccccgaaggcggcgatggtggcggcatgatcgtggcc
gagggcacgcccgaggatgtggccgcaagcgagcgcagccataccgggcgctacctgaaa
ccgatgctgaaccccgaacgggtggcggcggagtga
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