Ruegeria pomeroyi: SPO3529
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Entry
SPO3529 CDS
T00215
Symbol
glyA-3
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil00260
Glycine, serine and threonine metabolism
sil00460
Cyanoamino acid metabolism
sil00630
Glyoxylate and dicarboxylate metabolism
sil00670
One carbon pool by folate
sil00680
Methane metabolism
sil01100
Metabolic pathways
sil01110
Biosynthesis of secondary metabolites
sil01120
Microbial metabolism in diverse environments
sil01200
Carbon metabolism
sil01230
Biosynthesis of amino acids
sil01240
Biosynthesis of cofactors
Module
sil_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SPO3529 (glyA-3)
09102 Energy metabolism
00680 Methane metabolism
SPO3529 (glyA-3)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SPO3529 (glyA-3)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SPO3529 (glyA-3)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SPO3529 (glyA-3)
Enzymes [BR:
sil01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SPO3529 (glyA-3)
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Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
SelA
Motif
Other DBs
NCBI-ProteinID:
AAV96754
UniProt:
Q5LMN4
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Position
complement(3736979..3738274)
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AA seq
431 aa
AA seq
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MPAHCETRVQQIAETTARADSDAIDAHLEALIEENRTIHDAECFNLNPATNVMNPRAEAV
LARGLGSRPSLGYPGDKYEMGLEAIEEIEVIAAELAAKVFNARYAEIRVGSGALANLYGF
MALTRPGDTIIAPPASIGGHVTHHKAGCAGLYGLKTIEAPVDADGYSLDLSALAELAERH
RPRLITVGGSLNLFPHPVAAVREIADRVGAKVLFDAAHQCGIIAGGAWANPLDEGAHLMT
MSTYKSLGGPAGGLIVTNEAEIAERLDAIAFPGMTANFDAAKSAALAISLLDWVDHGAAY
AQAMVDLAQALAAELEALGLPVFHGAGGATASHQFAVEAARFGGGQAASKTLRRAGFLAC
GIGLPIAPVAGDMNGLRIGTPELVRRGVTPEHAAELAWLITQGLTGNDPEAVALRTREMR
ARFQGMHHIRS
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgcccattgcgaaacccgcgttcagcaaatcgccgagaccacggcacgcgccgac
agcgatgccatcgacgcccacctggaggcgctgatcgaagagaaccgcaccatccatgac
gcggaatgtttcaacctgaacccggcaaccaatgttatgaacccgcgcgccgaggcggtg
ctggcgcggggattgggcagccgcccctcgctgggctatcccggcgacaaatacgagatg
gggctggaggcgatcgaagagatcgaggtgattgccgcagaactggcggcaaaggtgttc
aacgcgcgctatgccgagatccgggtgggctcgggcgcgctcgccaatctttatggcttc
atggcgctgacccggcccggcgatacgatcatcgcgccaccggccagtatcggtggccat
gtaacccatcacaaggcgggctgtgcggggctttatggcctaaaaaccatcgaggcgccg
gtggatgcggatggttacagcctggatttgagcgcgctggcagagttggcagagcggcac
cggccccggctgatcacggtgggcggctcgctcaacctgtttccgcatccagttgcagcc
gtgcgcgagattgccgacagggttggtgccaaggttctgttcgacgcggcgcatcaatgc
ggcatcatcgcgggcggcgcctgggccaacccgctggacgagggggcgcatctgatgacg
atgagcacctacaagagcctcggcggccctgccggcgggctgattgtgaccaacgaggcc
gagatcgccgaacggctggacgccatcgcctttcccggcatgaccgcgaatttcgacgcg
gcgaaatcggcggcgttggcgatctcgctgttggactgggtcgatcatggcgcggcttat
gcccaggccatggtcgatctggcgcaggcgctggccgccgagttggaggcgctgggcctg
ccggtgtttcatggcgcgggcggggccaccgcctcgcaccagttcgcggtcgaggcggcg
cggttcggcggcggtcaggcggcgtccaagacgctgaggcgggcaggcttcctggcctgt
ggcatcggcctgccgatcgcgccggttgcgggggatatgaacggccttcggatcggcacg
ccggagctggtgcgccgaggggtcacgccagagcatgccgccgaactggcctggctgatc
acccaaggtctcaccggcaacgatcccgaagcggtggcgctgcgcacgcgtgagatgcgg
gcgcggtttcaggggatgcaccatatcaggtcgtga
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