KEGG   Sphingobium indicum: SIDU_04340Help
Entry
SIDU_04340        CDS       T04604                                 

Gene name
gatB
Definition
(GenBank) glutamyl-tRNA amidotransferase
  KO
K02434  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Organism
sinb  Sphingobium indicum
Pathway
sinb00970  Aminoacyl-tRNA biosynthesis
sinb01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:sinb00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    SIDU_04340 (gatB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:sinb03029]
    SIDU_04340 (gatB)
Enzymes [BR:sinb01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     SIDU_04340 (gatB)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     SIDU_04340 (gatB)
Mitochondrial biogenesis [BR:sinb03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    SIDU_04340 (gatB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: GatB_N GatB_Yqey
Motif
Other DBs
NCBI-ProteinID: APL93804
UniProt: I5BCK6
LinkDB All DBs
Position
904398..905900
Genome map
AA seq 500 aa AA seqDB search
MTESTYRIQGATGEWEVVIGLEVHAQVTSQAKLFSGAATAFGAEPNTQVSLVDAAMPGML
PVPNRECIRQAVRTGMAIKAQINKWSRFDRKNYFYADLPQGYQISQLYHPLVGEGAIEIS
LDDKNPDAATKKIGIERIHVEQDAGKLMHDQHPTRSYVDLNRSGVALMEIVSKPDMRSPA
EAGAYLSKLRTILRYVGSCDGNMDQGSMRADVNVSVRKPGEPFGTRTETKNVNSVRFVMA
VVEHEANRQVDVLEAGGKVVQETRLYDPDRNETRSMRSKEDAHDYRYFPDPDLLPLELDD
AFLEECRQSLPELPDAKRRRYEKDLGLSAYNAATLTADADTARWFEALLAEGARIQKKSE
GEVAKASANWLLSELYGALNRLGKSLEDSPVGPEEGAELLALIADGTISGTIAKQVFEIM
LETGDSAPKIVEEKGLKQTSDTGAIEAAVAKVLADNGDKVEQYKAGKEALFGFFVGQTMK
AMQGKANPQVVNELIRKALS
NT seq 1503 nt NT seq  +upstreamnt  +downstreamnt
atgaccgaatcaacctatcgcatccagggcgcaaccggcgagtgggaggtcgtgatcggc
ctggaagtccatgcgcaggtgacgagccaggcgaagctcttttccggcgccgccacggct
ttcggggcggagccgaacacgcaggtgagccttgtcgacgcggccatgcccggcatgctg
cccgtgcccaatcgcgaatgcatccgccaggcggtgcgcaccggcatggcgatcaaggcg
cagatcaacaaatggtcgcgcttcgaccggaaaaactatttctacgccgacctgccgcag
ggctaccagatcagccagctctaccacccgctggtgggcgagggcgccatcgagatcagt
ctggacgacaagaatcccgacgccgcgaccaagaagatcggcatcgaacgcatccacgtc
gagcaggatgcgggcaagctgatgcacgaccagcatccgacgcgctcctatgtcgacctg
aaccgttcgggcgtcgcgctgatggagatcgtgtcgaagcccgacatgcgctcccccgcc
gaggccggggcctatctgtcgaagctgcggacgatcctgcgctatgtggggtcgtgcgac
ggcaatatggatcagggttcgatgcgcgccgacgtcaacgtctcggtccgcaagccgggc
gagccattcggcacccgtaccgagacgaagaatgtgaactcggttcgtttcgtcatggcg
gtggtcgagcatgaagccaaccggcaggtcgacgtgctggaagccggtggcaaggtggtg
caggaaacgcgcctctacgatccggacaggaatgaaacgcgttccatgcggtcgaaggaa
gacgcgcatgactatcgctatttccccgatccggacctgttgccgctggaactggacgac
gcatttctggaggaatgccgccagtcgctgcccgaactgcccgacgccaagcgtcgccgc
tatgagaaggatctggggcttagcgcctataatgccgccacgctgaccgccgacgccgac
accgcccgctggttcgaggcgctgctggccgagggcgcgcgcatccagaagaagagcgag
ggcgaggtggccaaggcttcggccaactggctgctgtcggagctttacggtgcgctcaat
cgtctgggcaagagcctggaggacagcccggtcgggccggaggaaggcgctgaactgctg
gccctgatcgcggacggcacgatcagcggcaccatcgccaagcaggtgttcgagatcatg
ctcgaaaccggcgacagcgcgcccaagatcgtcgaggaaaagggcctgaagcagaccagc
gacaccggcgccatcgaggcggcggtggccaaggtgctggccgacaatggcgacaaggtc
gaacaatataaggcgggcaaggaagcgctgttcggcttcttcgtcggccagacgatgaag
gcgatgcagggcaaggccaatccgcaggtcgtcaacgaactgatcaggaaggctttgagt
taa

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