Sphingobium indicum B90A: SIDU_04410
Help
Entry
SIDU_04410 CDS
T04604
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sinb
Sphingobium indicum B90A
Pathway
sinb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sinb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SIDU_04410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sinb03400
]
SIDU_04410
Enzymes [BR:
sinb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SIDU_04410
DNA repair and recombination proteins [BR:
sinb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SIDU_04410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
APL96235
UniProt:
A0A1L5BTQ0
LinkDB
All DBs
Position
926392..927045
Genome browser
AA seq
217 aa
AA seq
DB search
MTLQSPIPHGEAPHDCPLCPRLAVLRERNRAEHPGWWNAPVPHFGDPLGRIAIVGLAPGR
MGANRTGRPFTGDHAGDLLFATLAKFGLANGVYEARADDGLTLRGAIILNAVKCLPPQNR
PLPEEVHNCRAFLKAAVEALPHAQVFLALGQIAHQSTVKALGGKLPKARFAHMAEHRMPS
GKIVIDSYHCSRYNQNTGRLTARMFEAVFARALALSE
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgcaaagtcctatcccgcatggcgaggcgccccacgattgcccgctttgcccg
cgcctggccgttttgcgcgaacggaaccgggcggaacatcccggctggtggaacgcgccg
gtcccgcatttcggcgatccgctcggccggatcgcgattgtcggcctggcgcccggcagg
atgggcgccaaccgcacgggccggcccttcaccggggatcatgccggcgatctgctcttt
gccaccctcgccaagttcggcctcgccaacggcgtctatgaagcgcgcgccgacgacggc
ctgacattgcgcggcgccatcatcctcaacgcggtcaaatgcctgccgccgcagaacagg
ccactgccggaggaggtccacaattgccgcgccttcctgaaggccgcggtggaggccctg
ccccacgcgcaggtcttcctcgccctgggtcagatcgcgcatcagtcgacggtcaaggcg
ctgggcggcaagctccccaaggcgcgcttcgcccatatggcggagcatcgcatgcccagc
ggcaagatcgtcatcgatagctatcattgttcgcggtacaaccagaataccgggcgattg
acggctcggatgttcgaggccgtcttcgcccgggcgctggcgctcagcgaatga
DBGET
integrated database retrieval system
