Sphingobium indicum B90A: SIDU_04465
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Entry
SIDU_04465 CDS
T04604
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sinb
Sphingobium indicum B90A
Pathway
sinb00260
Glycine, serine and threonine metabolism
sinb00460
Cyanoamino acid metabolism
sinb00630
Glyoxylate and dicarboxylate metabolism
sinb00670
One carbon pool by folate
sinb00680
Methane metabolism
sinb01100
Metabolic pathways
sinb01110
Biosynthesis of secondary metabolites
sinb01120
Microbial metabolism in diverse environments
sinb01200
Carbon metabolism
sinb01230
Biosynthesis of amino acids
sinb01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sinb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SIDU_04465 (glyA)
09102 Energy metabolism
00680 Methane metabolism
SIDU_04465 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SIDU_04465 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SIDU_04465 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SIDU_04465 (glyA)
Enzymes [BR:
sinb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SIDU_04465 (glyA)
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
APL93825
UniProt:
A0A1L5BLP1
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Position
complement(936268..937581)
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AA seq
437 aa
AA seq
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MSTATLDQPSDIRSEGYFTRSLADADPAVFAGVTHELKREQNQIELIASENIVSKAVLEA
QGSVFTNKYAEGYPGKRYYQGCAPSDEVEQLAIDRAKQIFNCGYVNVQPHSGAQANGAVM
LALTKPGDTIMGLSLDAGGHLTHGAKPALSGKWYNAVQYGVREDTHVIDYDALEAQAVEA
KPTLIIAGGSAYPRHLDFARFRAIADKVGALLMVDMAHFAGLVAGGAHPTPFGHAHVVTT
TTHKTLRGPRGGMILTDDEAIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALRPEFKTY
AQAIVANAKALAGKLEQRGLAVVSGGTDTHLALIDLRPYGISGKDADEALERSFITCNKN
GVPGDPLPPTKTSGIRVGSPAGTTRGFGVAEFEAIGDMIADVLEGLRDHGEHGDAAIEAD
VRERVSALCARFPIYEG
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgcaaccctcgaccagccttccgacatccgttccgaaggctatttcacgcgc
agcctggccgatgccgatccggcggtcttcgcgggcgtcacccatgaactgaagcgcgag
cagaaccagatcgaactgatcgcttcggaaaatatcgtgtcgaaggcggtgctggaggcg
cagggttcggtcttcaccaacaaatatgccgaaggctatccgggcaagcgctattatcag
ggctgcgcgccgtcggacgaggtcgagcaattggccatcgaccgggcgaagcagatcttc
aactgcggctacgtcaatgtgcagccccattcgggcgcgcaggcgaacggtgcggtgatg
ctggcgctgacgaagccgggcgacaccatcatgggcctgtcgctggatgcgggcgggcac
ctgacgcacggcgcgaagcccgcgttgtcgggcaaatggtataatgccgtgcaatatggc
gtgcgcgaagacacgcatgtgatcgactatgacgcgctggaggcgcaggcggtcgaggcc
aagccgacgctgatcatcgcgggcggttcggcctatccgcgtcatctggactttgcccgc
ttccgggcgattgcggacaaggtcggcgcgctgctgatggtcgacatggcgcatttcgcc
ggcctggtggcgggcggcgcgcatccgacgcccttcggccatgcccatgtcgtgaccacc
accacgcacaagacgctgcgcgggccgcgtggcggcatgatcctgaccgatgacgaagcc
attgcgaagaagatcaattcggcggtgttccccggccttcagggcgggccgctgatgcat
gtgatcgcggcgaaggcggtggccttcggcgaagcgctgcggcctgagttcaagacctat
gcccaggccatcgtcgccaatgccaaggcgcttgccggcaagctggagcagcgcggcctg
gccgtggtttcgggcggcacggacacgcatctggcgctgatcgacctgcgcccctatggc
atttcgggcaaggatgcggacgaggcgctggagcgcagcttcatcacctgcaacaagaat
ggcgtgccgggcgacccgctgccgccgaccaagacgagcggcattcgggtcggttcgccc
gcaggcacgacccgcggcttcggcgttgcggaattcgaggccatcggcgacatgatcgcg
gacgttctggaagggctgcgcgatcatggcgaacatggcgatgccgcgatagaagccgat
gtgcgcgagcgcgtttcggccctctgcgcccgtttccccatctacgaaggataa
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