KEGG   Sphingobium indicum: SIDU_10490Help
Entry
SIDU_10490        CDS       T04604                                 

Definition
(GenBank) DNA polymerase
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
sinb  Sphingobium indicum
Pathway
sinb03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sinb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SIDU_10490
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sinb03400]
    SIDU_10490
Enzymes [BR:sinb01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     SIDU_10490
DNA repair and recombination proteins [BR:sinb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     SIDU_10490
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DUF4130 UDG
Motif
Other DBs
NCBI-ProteinID: APL94906
UniProt: A0A1L5BPW1
LinkDB All DBs
Position
2187581..2188975
Genome map
AA seq 464 aa AA seqDB search
MHRARLNGPDDFDGWRVAARAFALAGTKPADILWQTGDEGDLFAADEAPPPVGEVAFSVP
RAFVELAERAILHRDAERFALLYALLVQLRDRPASLEDRADPLVRRVEALAKAVRRDMHK
MRAFVRFRELADAEGPRFVAWFEPDHHIVRANAGFFARRFASMRWSILTPELSIHWDGDA
LTEGPGATRRDAPAQDPVEDIWKGYYAAIFNPARLKVGAMLSEMPRKYWRNLPEAALIPE
LVAGAQSREAAMIATPPKPSARQGNAAAAWSALREEAMGCTRCPLYRDTTQTVFGEGPVD
APLMFIGEQPGDQEDLAGRPFVGPAGQLFDYALEEAGIDRRRAYITNAVKHFKHERRGKR
RIHQTPETPEIQACRWWLTQELELVRPRIIVALGATAGRALLGKAVTISRVRGAPIALES
GAQGWITVHPSYLLRVPDEARKMEERKRFVAELREIGEQVKVLA
NT seq 1395 nt NT seq  +upstreamnt  +downstreamnt
atgcatcgcgcgcggctgaacggaccggatgatttcgacggttggcgcgtggccgcgcgc
gccttcgccctcgccggcacgaagccagccgacatcctctggcagacaggggatgaaggc
gatctcttcgcggcggacgaagcgcctccgcccgtaggcgaggtcgccttttccgttccg
cgcgcctttgtcgaactggcggaaagggcaatcctgcaccgcgatgcggagcgtttcgcc
ctgctctacgccctgctcgtccaattgcgcgaccgccccgccagcctggaggatcgtgcc
gacccgctggtccgccgggtggaggccttggccaaggcggtgcggcgcgacatgcacaag
atgcgcgccttcgtccgcttccgcgaactggccgatgcggaggggcctcgcttcgtcgcc
tggttcgagccggaccatcatatcgtccgcgccaatgccggattcttcgcgcgccgtttc
gcctcgatgcgctggtcgatcctgacgccggaactcagcatccattgggacggcgatgcg
ttgaccgaaggaccgggcgccacccgccgggatgcgcccgcgcaagacccggtcgaggac
atctggaagggctattatgcggcgatcttcaatccggcgcggctcaaggtcggcgcgatg
ctgtccgaaatgccccggaaatattggcgcaacctgcccgaagccgcgctcatcccggag
cttgtggcaggcgcccagtcacgggaggcggccatgatcgcgacgccgcccaagccttcc
gcccggcaggggaacgccgcggcggcctggagcgcgctgcgggaggaggcgatgggttgc
acccgctgcccgctctaccgcgacacgacccagacggtgttcggagaagggccggtcgac
gccccgcttatgttcatcggggaacagcccggcgatcaggaggatctggccgggcgcccc
tttgtcgggccggccgggcaattgttcgactatgcgctggaggaggcggggatcgaccgc
aggcgcgcctacatcaccaacgccgtcaagcatttcaagcatgagcggcgcggcaagagg
cgcatccaccagacgcccgaaacgccggaaatccaggcatgccgctggtggctgacgcag
gagctggagctggtccggccccggattatcgtcgcgctcggcgccacggcggggcgggcg
ctgctggggaaggcggtgacgatcagccgcgtccgcggcgcgcccatcgccctggagagc
ggcgcgcagggctggatcacggtgcatcccagctatttgctgagggtgccggatgaggct
cgcaagatggaggagagaaagcgcttcgtcgcggaactgcgggagattggagagcaggtg
aaggtgctcgcctga

DBGET integrated database retrieval system