KEGG   Sphingobium indicum: SIDU_12885Help
Entry
SIDU_12885        CDS       T04604                                 

Definition
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
sinb  Sphingobium indicum
Pathway
sinb03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sinb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SIDU_12885
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sinb03400]
    SIDU_12885
Enzymes [BR:sinb01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     SIDU_12885
DNA repair and recombination proteins [BR:sinb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     SIDU_12885
 Prokaryotic type
     SIDU_12885
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: UDG
Motif
Other DBs
NCBI-ProteinID: APL95336
UniProt: A0A1L5BR38
LinkDB All DBs
Position
2702993..2703688
Genome map
AA seq 231 aa AA seqDB search
MSDTIRLDESWRAPLLGEFESPYMQGLKRFLEEEKRQGKRIFPKGSEYFRALDLTPLDKV
KVVVLGQDPYHGEGQAHGLCFSVKPGVRTPPSLVNIYKELQSDLGLRPPRHGFLEHWARQ
GVLLLNSVLTVEMGKAASHQKRGWEQFTDAIIRLVNQKNEPVVFLLWGSYAQRKAEFVDR
TRHLVLKAAHPSPLSAHNGFLGCRHFSQANAFLEEKGRGAIDWGLPETVAA
NT seq 696 nt NT seq  +upstreamnt  +downstreamnt
atgagcgacaccatcaggctggacgagagctggcgcgccccgctgctcggcgaattcgaa
agcccctatatgcaggggctgaagcgctttcttgaggaggagaagcgtcagggcaagcgc
atcttccccaagggcagcgaatatttccgggcgctggacctgacgccgctggacaaggtg
aaggtggtggtgctggggcaggatccctatcatggcgaggggcaggcgcatgggctgtgc
ttcagcgtaaagccgggcgtgcggacgccgccgtcgctggtcaatatctacaaggaattg
cagagcgacctgggcctgcggccgccgcgtcacggtttcctggaacattgggcgcggcag
ggcgtgctgctgctgaacagcgtgctgacggtggagatgggcaaggccgcgtcgcaccag
aagcgcggctgggagcagttcaccgacgccatcatccggctggtcaatcagaagaacgag
ccggtcgtgttcctgctgtggggcagctatgcgcagcgcaaggcggagtttgtggaccgc
acgcggcatctggtgcttaaggcggcgcacccctcccccctttcggcgcataacggcttt
ctggggtgcaggcatttttcgcaggccaacgcctttctggaggagaaggggcgcggggcg
atcgactggggcttgccggaaacggtggcggcatga

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