Sesamum indicum (sesame): 105167936
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Entry
105167936 CDS
T04135
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
sind
Sesamum indicum (sesame)
Pathway
sind04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
105167936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sind04121
]
105167936
Ubiquitin system [BR:
sind04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
105167936
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Motif
Pfam:
Transp_inhibit
F-box_5
LRR_6
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
105167936
NCBI-ProteinID:
XP_011086127
UniProt:
A0A6I9TXE4
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Position
LG8:8316285..8322428
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AA seq
590 aa
AA seq
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MNPDPKKSKVLPSNLPNSNGSSHPHSLFPDEVLEKVLSLIDSHKDRNSVSLVCKDWYNAE
RWTRSNLFIGNCYSVSPEIVARRFAKIKSVRLKGKPRFSDFNMLPRDWGANVHSWLVMFA
KAYPFLEELRLKRMTVSDESMELLAKSFPQFRALSLSSCDGFTDDGLKAITTHCGNLTEL
DIQDSVTVDVGGGWLSCFPENFSSLEILNFSSLNSEVSFEALEKLVSRCRSLRVLKVNEN
ITLDQLQRLLVHAPLLTELSTGSFLQELTPRQYEDIESAFGNSKNLQVLSGLWDATSFYL
PVLYGACSGLTFLNLSDAVLQSGELAKLLAHCPNLRRLWVIDTVEDKGLEAVGSSCPLLE
ELRVFPVDPYDLDHRHGVTEMGFLAVSRGCRKLRYVLYFCRRMTNAAVVTIVQNCPDFTH
FRLCIMNPRQPDFLTNEPMDEAFGAVAKNCTKLRRLSVSGLLTDTTFEYIGKYAKNLETL
SVAFAGSSDRGMQCVLEGCPKLRKLEIRDCPFGNAALLSGLKKYEMMRSLWMSACNLTMK
GCRLLAREMPRLNVEVIKDDGSDEIQADKVYVYRSVAGPRQDAPSVVLTL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagaccccaagaagtccaaagtcttaccatcaaacttacccaactcgaatggt
tcaagtcaccctcactcgctgttcccagatgaagtcttggagaaggtcctgtcactcata
gattcacacaaggacaggaactcggtttcccttgtctgcaaagactggtacaatgctgag
agatggacaagatctaatctttttattggaaactgttattcagtgtctcctgagattgtg
gctagaaggtttgcaaagattaagagtgtcagactcaaagggaaacctcgcttttctgat
ttcaatatgttgccgcgggattggggtgctaatgtgcactcatggctggtcatgtttgcc
aaggcttacccgtttctggaggagctgaggctcaagaggatgacggtaagtgatgagagc
atggagctcttagccaagtcttttccgcaattcagggctttatctttgtcaagttgcgat
ggtttcactgatgatgggctcaaagccattaccactcattgtgggaacttgaccgagctc
gacatacaggatagtgtaacagtggacgttggtggaggttggctgagttgcttcccggag
aacttttcctcactggaaatcctaaacttttccagcctcaacagcgaggtgagttttgag
gccctggagaaacttgttagtaggtgcagatcattgagggtcctgaaggtcaatgaaaac
attaccttggaccaactacaacggctgcttgtgcatgctcctctgttaacagagcttagt
actggctcattcctgcaagaacttacacctcggcaatacgaggacattgaaagtgcattt
gggaatagtaaaaatctccaagttctttctggtttatgggatgctacttccttctatctc
cctgttctttatggagcttgttctggtctgactttcttgaacttgagtgatgcggtcctt
caaagtggtgaacttgcaaagcttcttgctcactgccctaatttgcgacgcctctgggtc
attgatactgttgaagacaaggggctcgaagctgttgggtccagctgtcccttgcttgaa
gaactccgagttttccccgttgatccttatgatcttgatcatcgccatggtgtgactgag
atgggcttcttggctgtctctcgtggatgccgtaaactccgctatgtcctctacttttgc
cggaggatgacgaatgctgctgttgtaaccattgttcagaactgccctgattttacccac
tttcgtctttgcataatgaatccgcgccagccagatttcctgacaaatgaacctatggac
gaagcctttggagctgtggctaaaaattgcacaaaactccgcaggctttcagtttcagga
cttcttactgacacgacattcgagtacatagggaagtatgccaaaaatctcgagactctt
tccgttgcttttgctggcagcagcgacagagggatgcagtgtgttctggaaggttgcccc
aagctgagaaagcttgagataagagactgcccatttggaaatgcagctcttctgtctggt
ctcaagaaatatgaaatgatgcgatcgttatggatgtcggcgtgtaacttgacaatgaag
ggttgcaggctacttgcacgggagatgccgaggttgaatgtcgaagtaatcaaagacgat
ggaagtgatgaaattcaagccgacaaagtttatgtctatcgttcagtagcagggccgaga
caggacgccccttccgttgttctcactctttga
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