Sinimarinibacterium sp. NLF-5-8: GT972_08325
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Entry
GT972_08325 CDS
T06400
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sini
Sinimarinibacterium sp. NLF-5-8
Brite
KEGG Orthology (KO) [BR:
sini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sini03016
]
GT972_08325 (truB)
Enzymes [BR:
sini01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GT972_08325 (truB)
Transfer RNA biogenesis [BR:
sini03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GT972_08325 (truB)
Prokaryotic type
GT972_08325 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QHS10147
UniProt:
A0A6P1UA10
LinkDB
All DBs
Position
complement(1721524..1722435)
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AA seq
303 aa
AA seq
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MSKPRRLRRAVSGILLLDKPLGLSSNAALQRVKHLYQADKAGHTGSLDPLATGVLPICLG
EATKLSGHLLEADKQYCADLRLGVQTSTGDAEGEVINTCAPPGDAALQVAATRLCGEIEQ
VPPMYSALKHRGQPLYALARQGVEVERKARQVRIDSLRVVRLTEDTARLWVRCSKGTYIR
TLAEDLARLAGSCASLSALRRTAVMPFEDRPLVTLEWLDQLAREGGQAAVDAQLLAPVEG
VRNWPQVRVDVALAAQLAQGRQVSVPLPVDRGRIAVLDEAGQLLGLAEAVGSSELAPRRW
LRG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagcctcgccgcctgcgccgcgcggtcagcggaattttgctgctggacaagccg
ctgggattgagttccaacgcggcattgcaacgggtcaagcatctgtatcaggcggacaag
gccgggcataccggcagcctcgatccgttggcaaccggcgttttgcccatctgcctgggt
gaggcgaccaaattgtcagggcatctgctggaagccgataagcaatactgcgcagatttg
cggctgggagtgcaaaccagtaccggcgacgccgaaggcgaggtgatcaacacctgcgcg
ccgccaggggatgcggcgttgcaggttgcagcgacgaggctatgcggtgaaatcgagcaa
gtgccgccgatgtactcggcgctcaagcatcgggggcagccgttgtatgccctggcgcgc
cagggcgtggaagttgaacgcaaggcgcggcaagtcaggatcgacagtttgcgtgtggta
aggctcaccgaggataccgcgcgcctgtgggtgcgctgctccaagggaacctatatccgc
acgctggctgaagatttggcgcgtctggccggtagctgtgcttcgctgagtgcactgcgg
cgcactgcggtaatgccttttgaggacaggccgctggtgacgctggagtggctcgatcag
ttggcgcgtgaaggcgggcaggcggctgttgatgcgcaactgctggcaccggtcgaaggc
gtgcggaattggccgcaagtgcgggtcgatgtggctttggcggcacaactggcgcaaggg
cggcaggtgtctgttccgttgccggtggatcgtggccggattgcggtgctcgacgaagca
gggcaattgctgggattggccgaggcggtgggttccagtgagctggcgccgcgccgctgg
ctgcgggggtga
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