KEGG   Sinorhizobium sp. CCBAU 05631: SS05631_c31880
Entry
SS05631_c31880    CDS       T05069                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
sino  Sinorhizobium sp. CCBAU 05631
Pathway
sino03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sino00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    SS05631_c31880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sino03400]
    SS05631_c31880
Enzymes [BR:sino01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     SS05631_c31880
DNA repair and recombination proteins [BR:sino03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     SS05631_c31880
SSDB
Motif
Pfam: LigD_Prim-Pol DNA_primase_S
Other DBs
NCBI-ProteinID: ASY58109
UniProt: A0A249NYL2
LinkDB
Position
3045785..3046798
AA seq 337 aa
MLEDKEATAVKLETTKPTDAAPKAAKRKSTAETSKASSSKGDADVLGVRISHPERILFEG
QGITKIDLARYYAVVADQMLPFAADHPLSLVRCPQGGERHCFYQKHASDGFPEAIREVPI
TEASGETENYMYVHDAKGLVSAVQMGTLEFHIWGATIGRLEKPDRLVFDLDPDPSVDFAT
VKAAAATLHDELAGIGLETLAMVTGGKGVHVIVPLRPNAEWDEAKAFAKRIAQTFAERDP
EHFVATMSKAKRKGRIFIDWLRNDRGSTAIAPYSTRARAGGPVATPVGWDELERLGAANS
FHIADILERIETGTDPWREVGEIKQSLTKKMLGSAIG
NT seq 1014 nt   +upstreamnt  +downstreamnt
ttgctcgaggacaaggaggccacggccgtgaaactggaaacaacgaagccgacagacgcc
gcgccgaaagccgcaaagcgcaaatccaccgccgagacgagtaaggcgtcgtccagcaaa
ggcgacgccgacgtcctcggcgtccggatctcgcaccccgagcgcatccttttcgaaggg
cagggcatcaccaagatcgatcttgcccgctactatgccgtcgtcgcggatcagatgctg
ccgtttgcagcagatcatccgctttcgctggtgcgctgcccgcagggcggtgagcggcac
tgcttctatcagaaacacgccagcgacggcttcccggaggcgatccgcgaagtgccgatc
accgaggcatcgggcgagaccgaaaactacatgtatgtccacgacgccaagggcctggtc
tccgccgtgcagatgggcacgctcgaatttcacatctggggggcgacgatcggtcggctg
gaaaaacccgatcgcctcgtcttcgacctcgatcccgatccgagcgtcgacttcgccacg
gtcaaggcggccgccgccacgctgcacgacgaacttgccggcattggcctcgagaccctt
gccatggtgaccggcggcaagggcgtccatgtcatagtgccgcttcgacctaatgccgaa
tgggacgaggcgaaagctttcgccaagcgcattgcacaaacgtttgccgagcgcgacccg
gagcatttcgtcgccaccatgtcgaaggcgaagcgcaagggacggatcttcatcgactgg
ctgaggaatgaccgcggctcgaccgcgatcgccccctattccacccgcgcccgcgccggc
gggcccgtcgccacgccggtcggctgggacgagctcgagcggcttggggccgccaacagc
ttccacatcgccgacatcttggagcgcatcgagacgggcaccgatccgtggcgggaagtc
ggcgagatcaagcagtcgctgacgaagaagatgctgggctcggcaatcggttag

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