Streptococcus iniae ISET0901: DQ08_04405
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Entry
DQ08_04405 CDS
T03285
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
siq
Streptococcus iniae ISET0901
Brite
KEGG Orthology (KO) [BR:
siq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
siq03016
]
DQ08_04405 (truB)
Enzymes [BR:
siq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DQ08_04405 (truB)
Transfer RNA biogenesis [BR:
siq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DQ08_04405 (truB)
Prokaryotic type
DQ08_04405 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DKCLD
Motif
Other DBs
NCBI-ProteinID:
AHY15710
UniProt:
A0A3L8GKW7
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All DBs
Position
884739..885620
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AA seq
293 aa
AA seq
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MKNGIINVKKEAGMTSHDVVFKLRKILWEKKIGHGGTLDPDVVGVLPIAVGKATRVIEYM
TEAGKVYEGEVTLGYATTTEDASGDTIEEKHVLTDLSETEVDLAMETFLGDITQIPPMYS
AVKVNGRKLYEYARAGEEVERPKRLVHISLFERTSPLTFKDGLCHFTFKVVCSKGTYVRT
LAVDLGKALGYPSHMSKLERTASAGLELADALTLGQIAEMVERNDESFFLPIEYGVSDLP
KLAITETEKTDISFGRKLALPSIEPLLAVFFKDQLVAVMEKQDELYKPRKVLI
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacggaattataaatgtaaaaaaagaggctggaatgacctcgcacgatgtggtt
tttaaactgcgcaaaatcctttgggaaaagaagattggtcacggtgggacgttggatccg
gatgttgttggtgttttaccaattgcagttggtaaggctactcgtgttattgaatacatg
actgaggctggtaaagtctatgaaggtgaagtaacattaggctatgctacaacaacagaa
gatgccagtggtgacacaattgaggaaaaacacgttctcacagacttaagtgaaactgaa
gtagaccttgcgatggagacgtttcttggcgacattacccaaatccctccaatgtactca
gcagttaaagttaatggtagaaaactctatgagtatgctagagctggtgaggaagttgag
cggccaaaaagattggtccacattagtttatttgaaagaacaagtccattgacttttaaa
gatgggctttgtcattttacctttaaagtggtttgtagcaaaggcacttatgtgagaacc
ttggctgtggatttaggtaaagctttgggctatccaagccatatgtctaaactagagcgt
actgcttcagcaggtttggaattggctgacgccttaacacttggtcaaattgctgaaatg
gttgagcgaaatgatgaatcatttttccttccaattgaatacggtgtttcagatctcccc
aaattagctattactgagactgagaagacagacatttcatttggtagaaaactagctctt
ccaagcatagagcctctcttagcggtcttttttaaagaccaattggtagccgtaatggaa
aaacaagatgagctctataaacctaggaaggttcttatctaa
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