Ruegeria sp. TM1040: TM1040_3021
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Entry
TM1040_3021 CDS
T00359
Name
(GenBank) D-3-phosphoglycerate dehydrogenase
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
sit
Ruegeria sp. TM1040
Pathway
sit00260
Glycine, serine and threonine metabolism
sit00270
Cysteine and methionine metabolism
sit00680
Methane metabolism
sit01100
Metabolic pathways
sit01110
Biosynthesis of secondary metabolites
sit01120
Microbial metabolism in diverse environments
sit01200
Carbon metabolism
sit01230
Biosynthesis of amino acids
Module
sit_M00020
Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
TM1040_3021
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
TM1040_3021
00270 Cysteine and methionine metabolism
TM1040_3021
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sit04147
]
TM1040_3021
Enzymes [BR:
sit01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
TM1040_3021
1.1.1.399 2-oxoglutarate reductase
TM1040_3021
Exosome [BR:
sit04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
TM1040_3021
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2-Hacid_dh_C
PGDH_inter
2-Hacid_dh
ACT
F420_oxidored
IlvN
NAD_binding_2
NAD_binding_7
Rossmann-like
UDPG_MGDP_dh_C
Motif
Other DBs
NCBI-ProteinID:
ABF65753
RoseoBase:
TM1040_3021
UniProt:
Q1GC63
LinkDB
All DBs
Position
3188663..3190258
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AA seq
531 aa
AA seq
DB search
MAPKVLISDKLSDAAVQIFRDRGIDVDFLPDVGKDKEKLAEIIGQYDGLAIRSATKVTPT
ILENATNLKVIGRAGIGTDNIDKEAASKKGVIVMNTPFGNMITTAEHAIAMMFAVARQVP
EASASTHAGKWEKSKFMGVELTGKTLGVIGAGNIGGIVCDRARGLKMKVVAYDPFLSEEK
AKKMQVEKVELDELLARADFITLHVPLTEQTKNILSRENISKTKKGVRIINCARGGLVDE
EALAEALTSGHVAGAAFDVFSVEPAKENPLFNLPNVVCTPHLGAATTEAQENVALQVADQ
MANYLLTGAVENALNMPSVTAEEAKIMGPWIKLADHLGAFAGQMTDEPITAINVLYDGVA
ADMNLDALNCSVVAGIMKKVNPDVNMVSAPVVAKERGIQISTTNQDKSGSFDGYIKVTVV
TAKRERSVAGTVFSDGKPRFIQIKGINIDAEVGAHMLYTTNQDVPGIIGTLGQTLGDMDV
NIANFTLGRNEVGGEAIALLYVDAEVPADARAKLAETGYFTQIKPLAFDVA
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggcccccaaagtactcatctccgacaaactctcggacgccgccgttcagatcttccgt
gaccgcggcattgacgtggatttcctacccgatgtgggcaaggacaaggaaaagctggct
gagatcattggccaatatgatggcctcgcgatccgctccgccaccaaagtgacgccgacc
attctggaaaacgccaccaacctaaaggtgattggccgcgccgggatcggcaccgacaac
atcgacaaggaagccgcgtcgaaaaagggtgtgatcgtcatgaacactcccttcggcaac
atgatcaccaccgccgaacatgcgattgcgatgatgttcgccgttgcgcgacaggtcccc
gaggcctctgcctcgacccatgccgggaaatgggaaaagtccaaattcatgggcgttgag
ctgaccggcaagaccctcggtgttattggtgcgggcaacattggcggcatcgtctgcgat
cgcgcccgtgggctgaagatgaaggttgtggcctatgatccgttcctatccgaggaaaag
gccaagaagatgcaggtcgaaaaggtcgagctggacgaactgctcgcgcgcgctgatttc
atcacgcttcatgttccgctgaccgagcagaccaagaatatcctgagccgcgaaaacatc
tccaagaccaagaaaggcgtgcgcatcatcaactgtgcccgtggcggtctggtggatgaa
gaagccctggccgaagccctgacctccggccatgtggctggcgcggcatttgatgtattc
tctgtggagcctgcgaaggaaaacccgctcttcaacctgcccaacgtggtctgcaccccg
cacctcggcgccgcgacgaccgaggcgcaggaaaacgtggcgctgcaagtcgcagatcag
atggcgaactacctcttgaccggtgccgttgaaaacgcgctcaacatgccatcggtgacg
gccgaggaagccaagatcatggggccgtggatcaaactggccgatcatctcggggccttt
gcgggtcagatgaccgacgagccgattactgcgatcaatgtgctctacgatggtgtggca
gcggatatgaacctcgacgcgctgaactgctcggtggttgcaggcatcatgaaaaaggtg
aacccggatgtgaacatggtctcggcacccgttgtggccaaagaacgcggcatccagatc
tctaccaccaatcaggacaagtccggctcttttgatggctatatcaaggtgactgtcgtc
acggcaaaacgcgagcgctctgtcgcaggcaccgtgttctcggatggcaaaccgcgcttc
atccagatcaagggcatcaatatcgatgccgaagtgggcgcgcatatgctctacaccacc
aaccaggacgtgccgggtatcatcggcaccttgggtcagactttgggcgatatggacgtc
aacatcgcgaactttacgcttggccgaaacgaggtcggcggcgaagcgatcgcgctcctt
tatgtggatgcggaggtccccgcagacgcgcgtgccaagctggcagagaccggttacttc
acccagatcaagccgctggcctttgacgtcgcctga
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