Setaria italica (foxtail millet): 101761391
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Entry
101761391 CDS
T02818
Name
(RefSeq) ubiquitin receptor RAD23b
KO
K10839
UV excision repair protein RAD23
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03420
Nucleotide excision repair
sita04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101761391
09124 Replication and repair
03420 Nucleotide excision repair
101761391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sita03051
]
101761391
03400 DNA repair and recombination proteins [BR:
sita03400
]
101761391
Proteasome [BR:
sita03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
101761391
DNA repair and recombination proteins [BR:
sita03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
101761391
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_3
Rad60-SLD_2
TECR_N
Dsc3_N
CUE
Ubiquitin_2
Ubiquitin_4
Crinkler
Motif
Other DBs
NCBI-GeneID:
101761391
NCBI-ProteinID:
XP_004951696
UniProt:
K3YTG5
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Position
I:complement(6023927..6028776)
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AA seq
368 aa
AA seq
DB search
MQLTVKTIKGANFEIRVQPNDTIMAVKQKIEEKLGKDSYPWGQQLLIFTGKILKDESTLD
ENKVSEKDFLVVMSSGKSKMSGSSGASSAQLSSTPATSQAPPVDAPRQAPQPPVAATTIS
QPEGPPAQAPSNTYAASNLLSGSNLDTMINQLMEMGGGSWDRDKVQQALRAAYNNPERAV
EYLYSGIPVTAEVAVPVGGQGSNTTDRAPTGEASLSGIPNTAPLNLFPQGGSNAGGGAGG
GPLDFLRNNQQFQALREMVHTNPQILQPMLQELSKQNPQILRLIQENHAEFLQLLNEPFE
GGEGDFLEQPEQDEMPHAISVTPEEQEAIGRLESMGFERARVIVAFFACDRNEELAANYL
LEHAGEED
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgacggtgaagaccatcaagggcgcgaacttcgagatccgggtgcagcccaat
gacacgattatggctgtaaagcagaaaattgaagagaaactaggaaaagatagttatcca
tggggtcaacaactgctaattttcactgggaagattttgaaagatgagagtactttggac
gagaataaagtcagcgaaaaagacttccttgttgtcatgtccagtgggaagagcaaaatg
tctggttcaagtggagcctcatctgcccagctctcaagcactcctgcaaccagtcaagca
cctcctgtagatgctccacgacaagctcctcaacccccggtggcagcaactacaatttct
cagcctgaaggacctcctgcacaggccccctcaaacacatatgcagcatcaaatctacta
tcaggaagcaatcttgacacaatgattaaccagctaatggagatgggtgggggcagttgg
gacagagataaagtccaacaggctcttcgtgctgcttacaacaacccagaacgtgctgtt
gaatacctgtactctggtattccagtaacagctgaagttgccgttcctgttggtggtcaa
ggttcaaacacgactgatcgagctccgacaggggaagccagtctctctggaattccaaac
actgctccactaaatcttttcccacaggggggttccaatgctggaggtggtgctggaggt
ggaccacttgattttcttagaaacaaccagcagtttcaagcacttagagaaatggtccac
acaaatccacaaatcttgcagcctatgctccaggaattgagcaagcagaatcctcaaatt
ctaaggttgattcaggagaatcatgctgagttccttcagttactaaacgagccctttgaa
ggtggcgagggggacttcttagaacaacctgagcaggatgaaatgcctcatgctatcagt
gttacaccagaggagcaggaggccattggacggcttgaatccatggggtttgagagagca
cgtgtcatagtggcattctttgcctgcgacaggaatgaggagctagctgccaactatctt
cttgagcatgctggtgaggaagattaa
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integrated database retrieval system
