KEGG   Setaria italica (foxtail millet): 101765342
Entry
101765342         CDS       T02818                                 
Name
(RefSeq) general transcription factor IIH subunit 2
  KO
K03142  transcription initiation factor TFIIH subunit 2
Organism
sita  Setaria italica (foxtail millet)
Pathway
sita03022  Basal transcription factors
sita03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sita00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    101765342
  09124 Replication and repair
   03420 Nucleotide excision repair
    101765342
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sita03021]
    101765342
   03400 DNA repair and recombination proteins [BR:sita03400]
    101765342
Transcription machinery [BR:sita03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     101765342
DNA repair and recombination proteins [BR:sita03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     101765342
SSDB
Motif
Pfam: Ssl1 C1_4 VWA_2 IBR Tfb4
Other DBs
NCBI-GeneID: 101765342
NCBI-ProteinID: XP_012703326
UniProt: K3Y7G5
LinkDB
Position
VII:complement(24542595..24547034)
AA seq 432 aa
MYGVGGGGGGFNAPSTTSGRRRNPGDEEEDEEEEGAEGRVLEAWERAYADDRSWEALQED
QSGLLRSIDTKTVVHAQYRRRLLLRSAAAAAARIQKGLIRYLYIVIDLSRAASEMDYRPS
RMAVVAKHAEAFIREFFDQNPLSHVGLVTIKDGISHRLTEIGGSPESQINALMGKLECSG
DSSLQNALELVNGYLDQVPSYGHKEVLILYSALNTCDPGDIMETIEKCKKSKIRCSVIGL
AAEIFICKHLCEETGGSYTVALDESHFKELLLEHAPPPPAIAEYAAANLIKMGFPQRGVE
DLISICSCHKKIKSGAEGYICPRCKVNVCELPTECRTCGLTLVSSPHLARSYHHLFPVAP
FDEVSSVPNRIQRGVQNCFGCQQNLFNPDGQTSLHVRCPKCNQHFCLDCDIYIHESLHNC
PGCESQRSFSSL
NT seq 1299 nt   +upstreamnt  +downstreamnt
atgtacggcgtcggcggcggtgggggcggcttcaacgcgccctccaccacctccggccgg
cgccgcaacccgggcgacgaagaggaggacgaggaggaggagggcgccgagggccgcgtc
ctggaggcgtgggagcgcgcgtacgcggacgaccgctcgtgggaggcgctgcaggaggac
cagtcgggcctcctccgctccatcgacaccaagaccgtcgtccacgcgcagtaccgccgc
cgcctcctgctccgatccgccgctgccgccgcggcccgcatccagaaggggctcatacgc
tacctctacatcgtcatcgacctctcccgggcagcttcagagatggattatcgtcctagt
agaatggcagttgttgcaaagcatgctgaggctttcataagagaattctttgaccagaat
cctttgagccatgttggcctagtgacaattaaagatggtatttctcatcgacttacagag
attggagggagcccagaatcacagattaatgctttgatggggaaacttgagtgttctggt
gattcatctctgcagaatgctctagaacttgtcaatggttatttagatcaagtaccatca
tatggtcacaaggaagtcttaattttgtactctgccctaaatacatgtgatcctggtgat
atcatggagacaatagaaaaatgtaagaagtccaaaattagatgctccgttattggtctt
gctgcagagattttcatatgcaaacatctctgcgaagagactggtggatcctacacggtt
gcactggacgagtctcatttcaaagaattgttgctggaacatgctcccccacctcctgca
attgcagaatatgctgcagctaatttgattaagatgggctttccacagaggggtgttgag
gatcttatatctatctgctcttgtcacaagaaaataaagtctggtgctgaaggttacata
tgtcccagatgcaaagttaatgtgtgtgagcttccgacggaatgtcgaacttgtggccta
acactagttagttctccacacttggcaaggtcatatcatcatctcttcccggtagcacca
tttgatgaggtttcctctgtcccgaatagaatccaaaggggagtacaaaactgttttggc
tgtcagcagaacctttttaaccctgatgggcaaactagcctccatgttcgctgcccaaaa
tgcaaccagcacttctgcctggattgtgatatttacatccatgagagcttgcacaattgc
cctggttgtgagagtcaacgcagtttctcatcactgtga

DBGET integrated database retrieval system