Setaria italica (foxtail millet): 101771822
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Entry
101771822 CDS
T02818
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear poly(A) polymerase 4-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101771822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101771822
Enzymes [BR:
sita01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
101771822
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
101771822
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
101771822
NCBI-ProteinID:
XP_022684249
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Position
VII:17797107..17802317
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AA seq
585 aa
AA seq
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MASSSDPPKQYGITKPLSLLGPVEADLQRTAELEKFLVEVGLYESPKESAKREEVPGQLD
RIVKSWVKQLTSQRGYTDQTVEDANAVLFTCGSYRLGVHGPGAGIDTLCVGPSYVNRQDL
SAGRFFFIVLHEILAQTEDVTELQPLPDAHVPVMKCKFHGTSIDLLYASISLLVVPADLD
VSQGSVLYDVDEATVRSLNGCRVADQILRLVPNIENFRMTLRCLKYWAKRRGIYSNVTGF
LDGVNWALLVARVCQLYPYSVPSMLVSRFYKVFSQWRWPNSVMLCSIEDELGFPVWDPRK
NPRDRSHHMPIITPAYPCMNSSSNVSTSTLRVMMEQFQFGNKICQEIEMNKXPFQFSEVY
KNYLQVDIIAQDDEDLRLWKGWVESRLRQLTLKIERDTYEMLQCHPYPHEYADPSRQCAH
RAFFMGLSRKEGVKIQEGQQFDVRGTVDEFRHETNLYMFWKPGMELAVSHVRRKQIPAYV
FPESFSIGDPLNSRHVNHQQQSNKYDTEDGTPTRPRDSQLKREHYYAGTDGATPRAAKKS
SVSPVHPKTTCNTQKCVKRKYVLYVRICKDDSQKFTFKSVAQKDE
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcagctctgatcccccaaagcaatacggaataaccaagccgttatcgttgctt
gggccagtggaggcggatctccagaggacggcggagttggagaagttcttggtagaggtg
ggcctatatgagagccccaaggagtctgctaagcgggaggaggtgccggggcagcttgac
cggattgtgaaatcctgggtgaagcaattgactagtcagagaggatataccgatcagacg
gttgaagatgcaaatgccgtactattcacctgtggctcatatcgtctaggggttcatgga
cctggggctggtattgatactctttgtgttggaccttcatatgtgaatcgtcaggatttg
tctgcaggaagatttttttttatcgtactgcatgagatattagcacaaacagaggatgtg
actgagttgcaacctttacctgatgcacatgtccctgttatgaaatgtaagttccatgga
acatcaattgaccttctttatgccagtatctccctcctagtggtaccagctgatttggat
gtctctcaaggatcagtgctttatgatgtcgatgaagcaactgtccgtagtcttaatggt
tgcagagtagcggaccaaattcttagacttgttccaaatattgagaatttccgcatgaca
ttaagatgtttgaagtactgggcaaaaagaagaggtatttactcaaacgttactggtttt
cttgatggtgtcaactgggctttgctggttgcacgtgtctgccagctctatccttattct
gttccaagtatgttggtctcacgattctacaaggttttttcccagtggcggtggccaaat
tcggttatgctttgttccatagaggatgaacttggtttccctgtttgggatccacgcaaa
aatcctcgagatagatctcatcatatgccaataataacccctgcatatccgtgcatgaac
tccagctctaatgtttcgacaagcacacttagggttatgatggaacaatttcagtttggt
aataaaatttgccaggaaattgaaatgaataagnngccctttcaattttccgaagtgtac
aagaattatctgcaggttgatatcatcgcccaggatgatgaagaccttagactttggaag
ggatgggtggaatctcgactacggcagctaactttgaagattgaacgtgatacatatgaa
atgctgcagtgtcatccatacccacatgagtatgcagatccttctagacagtgtgctcat
cgtgctttcttcatgggcttatcgaggaaagaaggtgtgaaaatacaggaaggtcaacag
tttgatgttcgtggaacagtagatgagtttaggcatgaaaccaacttgtatatgttctgg
aagcctgggatggaactagctgtttctcatgttaggaggaagcagatcccagcttatgta
tttccagagagttttagcataggagacccgctcaattcaagacatgtgaaccatcagcag
cagtctaataaatatgatactgaagatggcacaccgaccagacctcgggacagtcagctg
aagagagagcattattatgctggaactgacggtgctacccccagagctgccaagaagtca
tcagtcagcccagttcacccaaaaactacatgtaacactcagaaatgcgtaaagagaaag
tatgttttgtacgtgagaatctgtaaagatgatagtcaaaagttcacttttaaatccgtc
gctcagaaagatgaatag
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