Setaria italica (foxtail millet): 101781823
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Entry
101781823 CDS
T02818
Name
(RefSeq) DNA replication ATP-dependent helicase/nuclease DNA2 isoform X1
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101781823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sita03032
]
101781823
Enzymes [BR:
sita01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
101781823
DNA replication proteins [BR:
sita03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
101781823
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
101781823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dna2
AAA_12
AAA_11
AAA_30
AAA_19
PDDEXK_1
UvrD-helicase
Cas_Cas4
Dna2_Rift
ResIII
SLFN-g3_helicase
PhoH
Motif
Other DBs
NCBI-GeneID:
101781823
NCBI-ProteinID:
XP_022683840
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All DBs
Position
VII:28504620..28515036
Genome browser
AA seq
1285 aa
AA seq
DB search
MPPKKRAASAAASKKPPSSQPSQPAKFGILHFFERQTQASQNAKRQKPDPPPPPPPPPPP
PPPEEEPTEVSPEVTKALAPKRVRFSPGMLIKQSQDDGAAEVVTWKISPVNHRLGTAKSR
QFLGMALHPCSNNEKNSSLEAMKKWHSSPLGLSRCTASGRNSGIIGSALAGCDGVDDSQS
PFRTPPSLSYGCSEQLNGGGTSEGGLEPLGAGQHKKALLDLLDQVEDAIMEEELPVDTES
KVGQATNEDNTNKNCSSVSNGDLIVPSKKTIDAPPLDSFLVLEVSEKHKADDSSSDRYPV
KILRLLNEHSGKECALHLCDEWFHSLVGPGDTVNVIGEFGDQGKCIVDHDNNLVIVHPEL
LISGTRVASSFHCPRRSVLDDRLKSNEYSTSALIGTLLHQVFQAGLLEDAPSWQFLEQQA
KEVLVKNIESLYACEANESNMYSTLIEAIPKILNWFKCFLKGSKCSNVDFGHTEGRKTVG
VTEVMDIEEMAWAPRYGLKGMIDASVISRVDSCNGGSYDKIMPLEFKTGKGTSGQTAMEH
SAQVILYTLLMTERYLNKDIDSGLLYYLHTDQTLGIKVKRSDLIGIIMRRNELAAEILKA
SISQSFPPMLQSPSTCNRCRHLNSCTIYHKAHGGNAATSGLGDLFDNLVNHLTVSHHNFL
KHWDRLIDLEARASQVKKKNIFQPYHSNSGSGNCAPSYFALDIKNGHLIDSSGKSKRYIY
NFVYHKMQPETVDQAGAQFDSLDFSLKCGDPVVLSTQSGRIAVANGSIRDISRSHITVSL
PRRLRIPDSNSLSEPDDLTREIWRIDKDEFSSSFAIMRLNLVQLFAQNPQNSHLRKLIVD
LEAPRFDSGGLFSQDPALSYIRSLPNLNNDQQRSLHKILGAKDYSLILGMPGTGKTYTMV
HAVKSLLIRGESILLTSYTNSAIDTLLMKLKTEGVDFIRIGRHEAVHPDVRDHCLSTEVQ
SVDAIKARMEQVQVVGVTCLGIYHPLLAHKKFDTCIMDEAGQITLPVSLGPLMLATKFVL
VGDHYQLPPLVQSSEARENGMGISLFWRLSEAHPQAISALRCQYRMSSGIMELSNALIYG
NRLCCGSLEIANAKLKFSGRESVQLKLREILNADRAVIFANTDQIPALETKDHRTVNNPT
EAHIISWITKELLRRGVPQDDIGIITPYNAQVNLIQQCTDGLVEVHTIDKYQGRDKECII
VSFVRSTSNSRASGSSLLGDWHRINVLLTRAKKKLIMVGSRGTLSTIPLLRLLVDKVAEI
GGLLDLTNNDVRSLRELRGSCLNAQ
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgcctccgaagaagcgcgccgcctcggccgccgcctccaagaagccgccgtcgtcgcag
ccgtcgcaacccgccaagttcggcatcctccacttcttcgagcgccagacccaggcctcc
cagaacgccaagcgccagaagcccgacccccctccgcctccgcctcctcctcctcctccg
ccgccgcccgaggaggagccgacggaggtctcgccggaggtcaccaaggcgctggcgccg
aagcgggtcaggttttctcccggaatgttgattaagcagagccaggacgatggggccgcg
gaggtggtgacttggaagatctcgccggtgaatcatcgcctgggtacagcgaaatcgagg
caatttctggggatggcgcttcatccgtgctcaaacaacgagaaaaattcctcactcgag
gctatgaagaagtggcattcatctccattgggcttgtcgaggtgcactgcttcagggcgt
aattcaggcattattggatctgctctagctggctgtgatggtgtcgatgactctcagagc
ccatttcggactccgccatcgctctcctatggttgcagtgagcagttgaacggtggtggc
acttcagagggaggacttgaaccgctgggagcagggcagcacaaaaaggcattacttgat
cttctagatcaagttgaggatgcaattatggaagaagaattgccagttgatactgaaagt
aaagtagggcaagccacaaacgaggataataccaacaaaaattgttcttctgtttctaat
ggtgatttaattgtcccatccaagaaaaccattgatgccccacccttggatagtttcctt
gtattggaggtgtcagaaaaacataaagctgatgattcatcaagtgatcgttatcctgtt
aagatcctgcgcctgctgaatgaacactccgggaaagaatgtgccttgcatttgtgtgat
gagtggttccatagtcttgttgggcctggtgatactgtgaatgtcattggagaatttggt
gaccaaggaaagtgcattgttgatcatgacaacaatcttgttattgtccatccagagtta
ctcatttctgggacacgggttgcttccagcttccattgtccaagaagatctgtactggat
gacagactaaaaagcaatgaatattcaaccagtgccttgattggtactcttcttcatcaa
gtctttcaggctgggctacttgaggatgctccttcatggcaattcttggaacaacaagca
aaagaagttcttgtaaaaaacattgagagtttatatgcatgtgaagccaatgaaagcaac
atgtactccacgcttattgaagcaatccctaagatattaaactggttcaaatgcttttta
aagggttcaaaatgctccaatgttgattttggacatactgaaggaagaaagactgttggg
gtgactgaggtgatggatattgaggaaatggcatgggccccaagatacggtttgaaaggg
atgattgatgcttctgtaatatcaagggtcgactcatgcaatggtggctcatatgataaa
ataatgccactagagttcaaaactggtaaaggaactagtggccagacagctatggaacac
tctgctcaagtgatattgtacacactattgatgacagagagatacttgaataaggatatt
gactcgggtcttctgtattatcttcacacagaccagacattgggaattaaagtaaagagg
tctgatttaattgggataataatgcgccgcaatgagcttgccgcagagatcctaaaggca
tcaatttcacagagttttcctccaatgttacagagcccatcaacatgtaataggtgtcga
cacctgaactcttgcaccatataccacaaggcacatggaggaaatgctgcaactagcggg
cttggtgatctatttgacaaccttgtaaatcacttgacagtctcacatcataactttctt
aaacattgggatagattgattgatctcgaagctagagcttctcaggtaaaaaagaagaat
attttccagccctatcattcaaattctgggagtgggaattgtgcaccatcttattttgcc
cttgacataaaaaatgggcatttgatagattcttcagggaaaagcaaaagatacatatac
aactttgtttaccataagatgcagcctgaaacagttgaccaggcaggtgctcaatttgac
agcctagatttcagcctcaaatgtggtgatcctgtggtgcttagcactcaatctgggaga
atagcagttgcaaatggatctataagagacatcagtcgctcccacataacggtctcttta
ccacgccgtctgagaattccagatagtaattccttgtctgagccagatgacctcacacgt
gaaatttggcgtatagataaagatgagtttagttcttcgtttgccataatgagactcaac
cttgttcaactatttgctcagaatccacaaaattctcacctacggaagttgattgttgat
cttgaggctcccagatttgatagtggagggctgtttagccaagatcccgcactatcatac
atacgctcactgccaaatttgaacaatgaccaacaaagatcattgcataaaattctagga
gcaaaggattattctttaattttaggaatgcctggaacaggcaaaacatatacaatggtt
catgctgtgaagtcactattgataagaggagaatctattttgctaacttcatatactaac
tcagctattgatactctgctcatgaagttaaagactgagggtgtagattttattcggatt
ggaaggcatgaagctgtacatcctgatgtcagggatcactgcttgtcaactgaggtccaa
tcggtagatgccattaaagcaaggatggagcaagtgcaggttgttggagttacttgtttg
ggaatatatcatcccttgttagcacacaagaagtttgacacatgtatcatggatgaagct
gggcaaataacattaccggtatcactgggaccattgatgcttgcaactaagtttgttcta
gtaggagaccattaccaacttcctccacttgtccagagctctgaagctcgagaaaatggg
atgggcattagcttattttggaggttatcagaagcacatcctcaggcaatctcagcacta
cgctgccagtaccgcatgtcatctggcatcatggagctgtcaaatgcattgatttacggc
aataggttgtgctgtggttcattggaaattgcaaatgccaaactcaagttttctggtcga
gaatcagtgcaattgaagttgagagagatcttgaacgctgatagggctgtcatctttgcc
aacacagatcaaataccagcacttgagacaaaggatcacagaactgtgaacaatcccaca
gaagcacacataatttcttggatcaccaaagaattgctaaggagaggtgtacctcaagat
gatattggtatcataaccccatacaacgcccaagtgaatcttattcagcaatgcactgat
ggtttggttgaggttcacacaatcgataaataccagggtagggataaggaatgcataata
gtatcttttgtgcgctccacttcaaattccagggctagtggttcttctttgcttggtgac
tggcacaggatcaatgttctgttgacacgtgcaaagaaaaagctcatcatggttggatca
cgtggaaccctttcgacaatacctttgctaaggctccttgttgacaaggtagctgagatt
ggtggcctgttggacctgacaaataatgatgtgcgttctcttcgagaacttagaggttct
tgtttgaacgcacaatag
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