Setaria italica (foxtail millet): 101782451
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Entry
101782451 CDS
T02818
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101782451
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sita01009
]
101782451
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101782451
03036 Chromosome and associated proteins [BR:
sita03036
]
101782451
Protein phosphatases and associated proteins [BR:
sita01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
101782451
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
101782451
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
101782451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ComGF
Motif
Other DBs
NCBI-GeneID:
101782451
NCBI-ProteinID:
XP_004951407
UniProt:
A0A368PGC4
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All DBs
Position
I:2995789..3005343
Genome browser
AA seq
518 aa
AA seq
DB search
MEREPMSSDDRPEAAAESAQQQELEWRFAQVFGERAAGEDVQEVDIISSIEFDKSGDHLA
TGDRGGRVVLFERTDSGDSASRRELERQEYPITRHPEFRYRTEFQSHEPEFDYLKSLEIE
EKINKIKWCQTANNALFLLSTNDKTIKYWKVQEKKVKRVSVMNLDTSQSSGNGSSSSPGT
NSCKALLPNGGCSEKLYSPNNNMSFPPGGCASLRLPVVVTGQDLNHVARCRRVYAHAHDY
HINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDLKPANMEDLTEVITCAEFHPTH
CNTLAYSSSKGTIRLIDLRQSALCDNHAKLFEEHDAPGSRSFFTEIIASVSDIKFARDGR
HILSRDYMTLKLWDLNMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCISGDGLRVA
TGSYSNLFRVFGCAPGSTEASTLEASRNPMRRQVSNPARPTRTLTSLTRAVRRGGENTSV
DANGISYDLSTKLLHLAWHPTENSIACAAANSLYMYYA
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggagcgggagcccatgtcctccgacgaccgccccgaggcggcggcggagtcggcgcag
cagcaggagctggagtggcggttcgcgcaggtcttcggcgagcgcgcggcgggcgaggat
gtgcaggaagtggacataatatcttcaattgagtttgacaaatctggcgaccatcttgcc
actggagatagaggtggacgtgtggttttattcgaaaggacggactccggggatagtgct
agtcgaagagaacttgagaggcaagaatacccgatcactaggcaccccgagttccgttac
aggactgaatttcagagtcatgaacctgagtttgactacctgaaaagtctggaaatagag
gagaagattaacaagatcaagtggtgccaaacagccaataatgcactctttctcttgtct
acaaatgacaaaacaatcaagtattggaaggttcaagagaaaaaagtgaaacgagtttca
gtgatgaatttggatacctcccaaagttcaggcaatggttcaagttctagtccgggtacc
aatagttgcaaagctcttcttccaaatggtggatgctcagaaaagttgtacagtccaaac
aacaatatgtcatttcctcctggaggatgcgcatcattgcgtttgcctgtggtggttaca
gggcaagatttaaaccatgttgcgagatgccgacgtgtatatgcacatgctcatgattac
catattaattccatttcaaataatagcgatggcgaaacattcatatcagcagatgatctg
cgaataaacctttggaatttggaaattagcaatcagagctttaatattgtcgacttgaaa
cctgcaaacatggaggatctaaccgaggtgattacatgtgcggagttccatccaactcat
tgtaatacactagcatatagtagctcaaagggtactatccggcttattgatctgcgacag
tcagcactgtgtgacaaccatgctaaactatttgaggagcatgatgcacctggatcaaga
tccttttttacagagataattgcatcagtttcagatataaagtttgcaagggatggaagg
catattcttagtcgtgattatatgactctcaagttatgggatctaaacatggattcgggt
ccagttgcaactttccaagttcatgaatacttgaggcctaagctttgtgatctatacgag
aatgattcaatttttgacaaatttgaatgttgtatcagtggtgatggactccgtgttgca
actggttcttatagtaatttgtttcgtgtttttggttgtgctcctggaagtacggaggca
tccactttggaagccagcagaaatcccatgaggcgtcaggtgtctaatccagcaaggcct
acacggactctgacctctttgacccgtgccgtgaggagaggtggagaaaatacaagcgtt
gacgccaatggaatttcttatgacctttcaacaaaattgcttcatcttgcatggcaccca
actgagaactccattgcgtgtgccgccgcaaatagcttgtacatgtattacgcatag
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