Stappia indica: GH266_10545
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Entry
GH266_10545 CDS
T06350
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
siw
Stappia indica
Pathway
siw00061
Fatty acid biosynthesis
siw00071
Fatty acid degradation
siw01100
Metabolic pathways
siw01212
Fatty acid metabolism
siw02024
Quorum sensing
Module
siw_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
siw00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GH266_10545
00071 Fatty acid degradation
GH266_10545
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GH266_10545
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
siw01004
]
GH266_10545
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
siw04147
]
GH266_10545
Enzymes [BR:
siw01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GH266_10545
Lipid biosynthesis proteins [BR:
siw01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
GH266_10545
Exosome [BR:
siw04147
]
Exosomal proteins
Exosomal proteins of breast milk
GH266_10545
Exosomal proteins of breast cancer cells
GH266_10545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
YwhD
Motif
Other DBs
NCBI-ProteinID:
QGZ34914
UniProt:
A0A857C7F6
LinkDB
All DBs
Position
complement(2246800..2248788)
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AA seq
662 aa
AA seq
DB search
MAGSPVVERLDEDTFPKILLRNARVFADRPSMREKDLGIWQTWTWSQVLEEIRSFSIGLQ
DAGFKPGDRIAIIGANRPRLYWSMVAAQSLGGVPVPLYSDSVAEEMAYVLEHAEVRFACV
EDQEQVDKLLSMSEQLPKLEHIVYDDTRGLRDYDHTRLHSFEQLQVNGRAALAADGAREK
AWLEGIAAAKGADLAVMLYTSGTTGRPKGVMLSFDNLVISARNGNAFDKLNETEETIAYL
PMAWIGDHVFSLAQAYLAGYCVNCPENLDTVLSDRREIAPTYFFAPPRVFEGLLTLIMVR
MEDAGRLKKKMFDSFMALARRVGEPILNGEKVSLVDRLLYQLGEFMVYGPLKNQMGFTRL
RVGYTAGEAIGPEIFRFYRSLGLNLKQLYGQTEASVYITMQPDGEIFGDTVGMPAPDVEI
KIAENGEVLYRSPGVFVGYYKNDEATRTTKTEDGWVLTGDAGFIADNGHLKIIDRAKDVG
KLTDGSLFAPKYIENKLKFYPNVKEVVAFGDGRDFCGVFVNIDLTSVGSWAERNNVNYAS
YQELAAHPQVYEMIRSHVDEVNRDLANEPMMAGAQIKRFLVLHKELDADDGELTRTQKVR
RSFIADRYAPLIEALYDGSTNKHVRTEVTFEDGRKGAIEATVEIRDMQTYPAAGSGLREA
AE
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggcagggtcgcccgtcgtcgagcgcctcgacgaggacacctttccgaagattcttctg
cgcaatgcccgtgtcttcgccgaccggccgtccatgcgcgagaaggatctcggaatctgg
cagacttggacctggtcgcaggtgctggaggaaatccgctccttttcgatcggtcttcag
gacgccggcttcaagcccggagacaggatcgccatcatcggcgccaaccgtccgcggctc
tactggtcgatggtcgcggcgcagtcgctcggcggcgtgcccgtcccgctctattcggac
tcggtcgccgaagagatggcctatgtcctggagcatgcggaggtccgcttcgcctgcgtc
gaggaccaggagcaggtcgacaagctcctgtccatgtcggagcagctgcccaagctcgag
catatcgtctacgacgatacgcggggcctgcgcgactacgaccacacccggcttcattcc
ttcgagcagctgcaggtgaacggccgcgccgcgctcgccgccgacggcgcccgcgaaaag
gcctggctcgagggcatcgccgcggccaagggcgccgaccttgcggtcatgctctacacg
tccggcaccaccggccggccgaagggcgtgatgctgtccttcgacaatctcgtcatctcg
gcgcgcaacggcaatgccttcgacaagctgaacgagaccgaggagaccatcgcctacctg
ccgatggcctggatcggcgaccacgtgttctcgctggcccaggcctatctggccggatac
tgcgtcaactgcccggaaaacctcgacacggtcctgtccgaccggcgcgagatcgccccg
acctacttcttcgctccgccgcgcgtcttcgagggccttttgaccctcatcatggtccgc
atggaggatgccgggcggctcaagaagaagatgttcgacagcttcatggcgttggcgcgc
cgggtcggtgagccgatcctcaacggcgagaaggtgtcgctggtcgaccggctgctctac
cagctcggcgaattcatggtctacggccccttgaagaaccagatgggtttcacccggctg
cgcgttggctacacggccggcgaggcgatcggcccggagatcttccgcttctaccgctcg
ctcggcctcaacctgaagcagctctacggccagaccgaggccagcgtctacatcacgatg
cagccggacggcgagatcttcggcgacacggtcggcatgccggcgccggacgtcgagatc
aagatcgccgagaacggcgaggtgctctatcgctcgccgggcgtcttcgtcggctattac
aagaacgacgaggcgacccgcaccaccaagaccgaggatggctgggtgctgacgggcgac
gcgggcttcatcgccgacaacggccatctcaagatcatcgaccgtgccaaggacgtcggc
aagctcaccgatggctcgctgttcgcgccgaaatacatcgagaacaagctgaagttctat
cccaacgtgaaagaggtcgtggccttcggcgacgggcgcgacttctgcggcgtcttcgtc
aatatcgacctgacctccgtcgggtcctgggccgagcgcaacaacgtcaactacgcctcc
taccaggaactggcagcgcatccgcaggtctacgagatgatccgcagccatgtcgacgag
gtgaaccgcgacctggccaacgagccgatgatggcgggggcgcagatcaagcgcttcctg
gtgctgcacaaggagctggacgccgacgacggcgagctgacgcgcacgcagaaggtccgg
cgctccttcatcgccgaccgttacgccccgctgatcgaggcgctctacgacggttccacc
aacaagcatgtgcgcaccgaggtcaccttcgaggacggccgcaagggcgcgatcgaggcg
accgtcgagatccgcgacatgcagacctatccggccgcaggcagcggcctcagggaggcg
gcagaatga
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